Gene Pden_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4848 
Symbol 
ID4583409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp348120 
End bp349061 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID639772151 
Productribokinase-like domain-containing protein 
Protein accessionYP_918604 
Protein GI119387570 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.247088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.684962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGG TTCTGACCAT CGGCGAGGTT CTCGTCGAGA TCGTGGCGAC CACCCGCGGC 
AACGGCTTTC TCGAGGCGCA GCCGCTGGTC GGCCCTTTTC CCTCGGGCGC GCCGGCGATC
TTCATCGACC AGGTCGGCAA GATGGGCACG CCCTGCGCCA TCATCTCGCG CGTGGGCGAC
GACGATTTCG GCCGCGTGAA CATCGAGCGG CTGCGGGCCG ACGGCGTGGA TGTCTCAGGC
ATCGAGGTGG CGCCGGGCGA AAGCACCGGC AGCGCCTTCG TGCGCTATCG CGACGATGGC
AGCCGCGCCT TCGTCTACAA CATCCGCCAT GCCGCCTGCG GCAAGCTGCG ACCGACCGCG
GCGTCCGAGG CGCTGGTCGA AAGCTGCACC CATCTGCATG TCATGGGCTC GGCCTTTTCG
GCGCCGGAAC TGGGCGCGAT GGTGATGGAC GCGGCGCGGC GGATCAAGGC GCGGGGCGGC
ACGATCTCGT TCGATCCGAA CCTGCGGCCC GAACTCTTGG ACGTGCCCGG CATGCGCGCG
GCGCTGGATG CGGTGCTGGC GATGACGGAC CTGTTCATGC CTTCGGGCGA GGAATTGTTC
CTGTTCGATA CGGCCCGGGA TGAGGCCGCC GTGATCGCCG CCCTGCTGGA TCGCGGCATC
CGCACCGTGG TCGTCAAGCG CGGCGCGGCC GGCGCCAGCC TGTTCGAGCG GGGCTTGCGC
CTCGATGCCA TGCCGCTGGC GGTCGATGAG GTCGACCCGA CCGGCGCCGG CGACACCTTC
GGCGGCGCCT TCCTCAGCCT GTGGCTGGCC GGTTCCGACC CGGCCGAGGC GCTGCGCCTT
GCCAATGCCG CAGGCGCCCG CGCCGTGACC CGGCTGGGAC CGATGGAGGG AACCTCGACC
CGCGCGGAAC TGGACGCGCT GCTTTCGGAA CGGAAAGGCT GA
 
Protein sequence
MRKVLTIGEV LVEIVATTRG NGFLEAQPLV GPFPSGAPAI FIDQVGKMGT PCAIISRVGD 
DDFGRVNIER LRADGVDVSG IEVAPGESTG SAFVRYRDDG SRAFVYNIRH AACGKLRPTA
ASEALVESCT HLHVMGSAFS APELGAMVMD AARRIKARGG TISFDPNLRP ELLDVPGMRA
ALDAVLAMTD LFMPSGEELF LFDTARDEAA VIAALLDRGI RTVVVKRGAA GASLFERGLR
LDAMPLAVDE VDPTGAGDTF GGAFLSLWLA GSDPAEALRL ANAAGARAVT RLGPMEGTST
RAELDALLSE RKG