Gene Pden_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4842 
Symbol 
ID4583403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp341398 
End bp342396 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID639772145 
ProductABC transporter related 
Protein accessionYP_918598 
Protein GI119387564 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGA TTACGCTCAA CAAGGTGCGC AAGGCCTTCG GCGAGGCCGA GGTCATTCCC 
GGCATCGACC TGCAGATCGA CCACGGCGAG TTCGTGGTCT TCGTCGGCCC CTCGGGCTGC
GGCAAGTCCA CGCTGCTGCG GCTGATCGCC GGGCTGGAGG ACATCAGTTC GGGCAATATC
GTCATCGACG GGCGCGAGGC CAGCAACGCC CCGCCGGGCG AGCGCGGGCT GGCGATGGTG
TTCCAAAGCT ATGCGCTTTA CCCGCATATG TCGGTGCGCA GGAACATCGC CTTTCCGCTG
AAGATGGCGG GCATGGCGCA GGCCGAACAG GACCGCAAGG TCGAGGACGC GGCGCGCATC
CTGAACCTGA CGGGCTACCT GGGCCGCCGC CCCGGCCAGC TTTCGGGCGG CCAGCGCCAG
CGCGTCGCCA TCGGCCGCGC CATCGTGCGC GAGCCGGCGG CGTTCCTGTT CGACGAGCCG
CTGTCGAACC TTGATGCGGC GCTGCGCGTG ACCATGCGCC ACGAGATCAG CGAATTGCAC
CAGAAGCTGA AGACGACGAT GATCTATGTC ACCCACGACC AGGTCGAGGC GATGACCATG
GCCGACAAGA TCGTCGTCTT GCATGCCGGT CGGATCGAGC AGGTCGGCAG CCCGCTGGAG
CTTTACAACG CGCCCGCGAA CCTGTTCGTC GCGGGCTTCA TCGGCAGCCC GAAGATGAAC
TTCGTCACCG GCCCCGAGGC GGCAAGGCAC GGTGCCCATA CCATCGGCAT CCGCCCCGAG
CATCTGGAGA TCGTCGCCGA GGGCGGCTGG CAGGGCAGGG TGCATCTGGC CGAGCATCTG
GGATCGGACA CCTTCCTCAA GGTGGACAGT CCCGAGTTGG GCGAGCTGAC CGTCCGCGTC
AGCGGCGAAC GCGGGCTGAA CCCCGGCGAC GAGCTGCGGC TGATGCCGCG CCTCGAACGG
ATTTATCGTT TCTCTGAAGA TGGAAGGTCC ATGACATGA
 
Protein sequence
MGQITLNKVR KAFGEAEVIP GIDLQIDHGE FVVFVGPSGC GKSTLLRLIA GLEDISSGNI 
VIDGREASNA PPGERGLAMV FQSYALYPHM SVRRNIAFPL KMAGMAQAEQ DRKVEDAARI
LNLTGYLGRR PGQLSGGQRQ RVAIGRAIVR EPAAFLFDEP LSNLDAALRV TMRHEISELH
QKLKTTMIYV THDQVEAMTM ADKIVVLHAG RIEQVGSPLE LYNAPANLFV AGFIGSPKMN
FVTGPEAARH GAHTIGIRPE HLEIVAEGGW QGRVHLAEHL GSDTFLKVDS PELGELTVRV
SGERGLNPGD ELRLMPRLER IYRFSEDGRS MT