| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4817 |
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| Symbol | |
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| ID | 4583379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 314140 |
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| End bp | 315156 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639772121 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_918574 |
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| Protein GI | 119387540 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0285478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.34495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA CCCGCCGCAG CGTCCTGATG GGTGCCGCCG CAGGGGCGCT GGCCGCGCCC
TTCATCCGGC CGGGCGCCGC CCGCGCCGCC GAATTCAGCT ACAAGATCGC GAACAACCAG
CCGCTCGAAC ATCCCAGCAA CGTCCGGCTG GCCGAGGCGG TCAAGGCAAT CCTGGAAGAA
ACCTCGGGCG CGGTGGACAT CCAGATATTC CCCTCGAACC AGCTTGGCGC CGATACCGAC
GTGCTGGGCC AGCTGCGTTC GGGCGGGGTC GAGTTCTTCC AGCTTTCGCC GGTGATCCTG
TCAACGCTGG TGCCGAACGC CTCGATCAAC GGCGTGGGCT TCGCCTTTCC CGACTACGAC
ACGGTCTGGA AGGCGATGGA CGGCGAGCTG GGCGCCTATG CCCGCGGCCA GATCGAGAAT
GCCGGCCTGG TGGTGATGGA CAAGATCTGG GACAACGGCT TTCGGCAGAC CACAACCTCG
ACCAAGCCGA TCCAGGCGCC CGAGGATCTG CAAGGCTTCA AGATCCGCGT GCCGGTCAGC
CCGCTCTGGA CCTCGCTCTT CTCGGCCTTC GGCGCTGCGC CCGCCTCGAT CAACTTCGCC
GAGGTCTATA CCGCGCTGCA GACCGGCATC GTCGACGGGC AGGAAAACCC GCTGGCGATC
ATGAAGGTGG CCAAGCTGTG GGAGGTGCAG AAATACCTGT CCATGACCAA CCACATGTGG
GACGGGTTCT GGCTGCTGGG CAACCGCCGC GCCTGGGGCG CGCTGCCCGA GGATGCGCAG
CAGGTCGTCG CCAAGCACTT CAACGAAGGC GCGGACAGGC AGCGCGAGGA CGTGATGGCG
CTGAACGCCA CCCTGCGCGG CGACCTCGAA GAGCATGGCT TCGTCTTCAA CGACGTGGAC
CCGCAGCCCT TCGAGGACAA GCTGCGCGAG GCCGGCTTCT ATGCCGAGTG GAAAAAGACC
TATGGCGACG AGGCATGGGA GATCCTGGAA GCCGCCATCG GACGAAAGCT CGCCTGA
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| Protein sequence | MTITRRSVLM GAAAGALAAP FIRPGAARAA EFSYKIANNQ PLEHPSNVRL AEAVKAILEE
TSGAVDIQIF PSNQLGADTD VLGQLRSGGV EFFQLSPVIL STLVPNASIN GVGFAFPDYD
TVWKAMDGEL GAYARGQIEN AGLVVMDKIW DNGFRQTTTS TKPIQAPEDL QGFKIRVPVS
PLWTSLFSAF GAAPASINFA EVYTALQTGI VDGQENPLAI MKVAKLWEVQ KYLSMTNHMW
DGFWLLGNRR AWGALPEDAQ QVVAKHFNEG ADRQREDVMA LNATLRGDLE EHGFVFNDVD
PQPFEDKLRE AGFYAEWKKT YGDEAWEILE AAIGRKLA
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