Gene Pden_4802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4802 
Symbol 
ID4583364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp297880 
End bp298479 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID639772106 
ProductTetR family transcriptional regulator 
Protein accessionYP_918559 
Protein GI119387525 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.386552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.120275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGGA CACGGGCAGT GGATTTCGAG GAAAAGCAAC GCGGCCTTCT GGACAAGGCG 
GCCGAGGTCT TTGCCGAACT GGGCATGGAA AAGGCATCCA TGGCGCAGAT CGCCGCACAC
AGCCAGGTGT CCAAGGCGCT GCTTTACCAT TACTATCCCA GCAAGGACGC GCTGATCTTT
GCCATCATCA TCACCCATCT GGAAGAGCTC GACGCGGCCA TCGAGGAAAC CGACGATCCC
GGCCTGCCGC CGCAGCAGCG CCTGCGCCAG CTGGTGGGCA CGGTGCTGGA GCGTTATCGC
GGCGCGGACA ACCAGCACAA GGTGCAGCTG AACGCCACCC CTGCCCTGGG CGACGAGCAG
AAGGCCGAGA TCCTTGGCGT CGAGCGGCGC ATCGTCAAGC GCTTCGCCGC CGTCCTGCGC
GAGATCAACC CCGACCTGGA CGATCCGCAG CGCCCGCTGC TGACCCCGGT GACCATGTCG
CTGTTCGGGA TGATGAACTG GGTCTACATG TGGTTCCGCG ACGGCGGCCG CATCACCCGC
GAGGATTACG CCGACGTGGC GACGACGCTG ATCCTCGAGG GCATCAAGGC CGTGCGGTGA
 
Protein sequence
MARTRAVDFE EKQRGLLDKA AEVFAELGME KASMAQIAAH SQVSKALLYH YYPSKDALIF 
AIIITHLEEL DAAIEETDDP GLPPQQRLRQ LVGTVLERYR GADNQHKVQL NATPALGDEQ
KAEILGVERR IVKRFAAVLR EINPDLDDPQ RPLLTPVTMS LFGMMNWVYM WFRDGGRITR
EDYADVATTL ILEGIKAVR