Gene Pden_4738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4738 
Symbol 
ID4583241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp223876 
End bp224727 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID639772042 
ProductNapH/MauN family ferredoxin-type protein 
Protein accessionYP_918495 
Protein GI119387461 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02163] ferredoxin-type protein, NapH/MauN family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.474351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT GGCTGACCCT GTCCAGCCGG CATCGGGCCG CCGCCCGCCG GGGCTGGCTT 
TCGGCGCATA AATGGTGGCT CTTGCGCCGT TGCTGCCAGA TCGCGGCGCT GGCGGCCTTC
ATGTCCGGGC CTCTTGCCGG ATACTGGATC ATGCGCGGCA ATTTCGCGTC GAGCGAGATG
CTGGGCGTGC TCGGCCTCTC GGATCCCTAT ATCCTGCTGC AATCGGCTTT CGCCGGCTGG
CCGGTGGCAG CGCCGGCGCT GGTCGGCGCG CTGCTGATCG GGCTGTTCTA CCTGCTGGTC
GGCGGGCGGG TCTATTGCAG CTTCGTCTGC CCGGTCAACA TCGTCACCGA CACCGCGCAT
TGGCTGCGCG AAAAGACCGG GCTGACGCGG GACCGCAAGC TGGACCGGCG CACGCGGCTG
TGGCTATTGC TTGGCACGCT GCTGGCGGCG GCGCTGACCG GCACCATCGC CTGGGAATAT
GTGAACCCGG TCAGCATGAT GCAGCGCGGG CTGATCTTCG GCGCCGGGCT GGGTTGGAGC
ATCGTGCTGC TGGTGTTCCT GCTGGACCTG TTCGTCTCGC GCCGGGCCTG GTGCAGCCAT
CTGTGCCCGG TCGGCGCCTT TTACGGGCTG GTCGGGCGGT TCTCGCTGGT CCGCGTCTCG
GCCCGCAACC GGGATGCCTG CGACAATTGC GGCGCCTGCT TCAGCACCTG CCCCGAGCCG
CATGTCATCG TCCCGGCGCT GAAGGGCGAA GGCAGCCCGC TGATCCTGTC GGGCGATTGC
ATCAATTGCG GGGGCTGCAT CGATTCCTGC CCGAACCGGG TCTTTGCCAT GGCCAGCAGG
CTGCGGCCGT AA
 
Protein sequence
MIRWLTLSSR HRAAARRGWL SAHKWWLLRR CCQIAALAAF MSGPLAGYWI MRGNFASSEM 
LGVLGLSDPY ILLQSAFAGW PVAAPALVGA LLIGLFYLLV GGRVYCSFVC PVNIVTDTAH
WLREKTGLTR DRKLDRRTRL WLLLGTLLAA ALTGTIAWEY VNPVSMMQRG LIFGAGLGWS
IVLLVFLLDL FVSRRAWCSH LCPVGAFYGL VGRFSLVRVS ARNRDACDNC GACFSTCPEP
HVIVPALKGE GSPLILSGDC INCGGCIDSC PNRVFAMASR LRP