Gene Pden_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4712 
Symbol 
ID4583215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp201008 
End bp201745 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID639772016 
Productseptum site-determining protein MinD 
Protein accessionYP_918469 
Protein GI119387435 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.233951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00864523 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCGGCC ACAAGACGGT CGTGATCGAC TTCGACGTGG GCCTGCGCAA CCTGGACATG 
ATCATGGGCT GCGAACGGCG CGTGGTCTTC GACTTCATCA ACGTCATCCA GGGCGATGCG
AAGCTGAAGC AGGCGCTGAT CAAGGACCGG CGGCTTGAGA ACCTGCATGT CCTGCCGACC
TCGCAGACCC GCGACAAGGA CGCACTGACG ACCGAGGGCG TCAAGAAGGT GCTGGACGAA
CTGCGCGAGG AGTTCGACTA TATCGTCTGC GACAGCCCCG CCGGCATCGA GCGCGGCGCG
CATCTGGCGA TGTATTACGC CGACGAGGCG GTGGTGGTGA CCAACCCCGA GGTCTCTTCG
GTCCGCGACA GCGACCGGGT GCTGGGCCTG CTGAACAGCA AGACCGCGCT GGCGGAAAAG
GGCGACGGCA GCGCGGTCAA GGCGCAGCTG CTGCTGACCC GCTTTGACCA GAACCGCTCG
GCCAACGGCG AGATGATGAG CGTCGAGGAC GTGCTGGAGA TCCTGGCCAT CCCGCTGCTG
GGCATCATCC CCGAAAGCAC CTCGGTCCTG AAGGCTTCGA ACGAGGGCAC GCCGGTTTCG
CTGGACGAGA AATCGCCGGC GGGCAAGGCC TATATGGATG CGGTGGGCCG GCTGGTCGGC
GAGCAGATCG AGATGCGGGT GAACCCCGGC GAGCAGCGCC GCGGCTTCTT CCAGCGGCTT
CTGGGACGGA CGGCCTGA
 
Protein sequence
MRGHKTVVID FDVGLRNLDM IMGCERRVVF DFINVIQGDA KLKQALIKDR RLENLHVLPT 
SQTRDKDALT TEGVKKVLDE LREEFDYIVC DSPAGIERGA HLAMYYADEA VVVTNPEVSS
VRDSDRVLGL LNSKTALAEK GDGSAVKAQL LLTRFDQNRS ANGEMMSVED VLEILAIPLL
GIIPESTSVL KASNEGTPVS LDEKSPAGKA YMDAVGRLVG EQIEMRVNPG EQRRGFFQRL
LGRTA