Gene Pden_4706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4706 
Symbol 
ID4583209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp196513 
End bp197445 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID639772010 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_918463 
Protein GI119387429 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.10936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTGGG CTCCGGCCCA TGCGGAAACG GCGACAAGAA AAAGGGAGTA TCCGATGACC 
CATGCCCCCG AGGTGACAGG ATTCTACGAG GCGCGGACCG GCTCGGTGCA ATATGTCGTG
GCCGATCCGG CGACGAAGAA TTGCGCCATC ATCGACCCGG TGCTGGACTA TGACGAGAAA
TCCGGCGCCA CCGCCACCAT CGAGGCCGAC CGCATCCTGA ACTTCGTCGC CGGGCGCGGC
TATGCTGTGC AGTGGATTCT GGACACCCAT CCCCATGCCG ACCATTTCTC GGCCGCCGAC
TACCTCAAGC GCAAGACCGG CGCCCCCACC GCCATCGGCG AGAAGGTGGT CGAGGTGCAG
AAGCTGTGGA AGGAATTCTA CAACTGGCCG GATTTTCCCG CCGACGGTTC GCAATGGGAC
CGGCTCTTCG CCGAGGGCGA GACCTTCCGG GTCGGCGATA TCCCGGCCCG GGTGATGTTT
TCGCCCGGTC ATACGCTGGC CTCGATCAGC TATGTCATCG GCGACGCGGC CTTCGTGCAT
GACACGCTGT TCATGCCCGA CAGCGGCACG GCGCGGGCCG ATTTTCCCGG GGGCGACGCG
CATGTGCTGT GGCGCTCGAT CCAGGCGATC CTGGCCTTGC CGGACGAGAC GCGCGTCTTC
ACCGGCCACG ATTATTGCCA GGGCGGGCGC GAGCCGCGCT GGGAATCGAC GGTGGCCGAG
CAGAAGGCCC ACAACATCCA CATGGCGCAA TACCGCAGCG AGGCCGAGTT CGTCGCAGCG
CGCGAGGCCC GCGACCGAAC CCTGCCCATG CCCAAGCTGA TCCTGCATGC CTTGCAGGTC
AACACCAATG CCGGCCGCCT GCCCGAGCCG GAATCGAACG GGCGGCGCTA TCTGAAGATC
CCGCTGGACC TGTTGCAGGC GCCCTGGGAC TGA
 
Protein sequence
MHWAPAHAET ATRKREYPMT HAPEVTGFYE ARTGSVQYVV ADPATKNCAI IDPVLDYDEK 
SGATATIEAD RILNFVAGRG YAVQWILDTH PHADHFSAAD YLKRKTGAPT AIGEKVVEVQ
KLWKEFYNWP DFPADGSQWD RLFAEGETFR VGDIPARVMF SPGHTLASIS YVIGDAAFVH
DTLFMPDSGT ARADFPGGDA HVLWRSIQAI LALPDETRVF TGHDYCQGGR EPRWESTVAE
QKAHNIHMAQ YRSEAEFVAA REARDRTLPM PKLILHALQV NTNAGRLPEP ESNGRRYLKI
PLDLLQAPWD