Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4677 |
Symbol | |
ID | 4583180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 169987 |
End bp | 170670 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771981 |
Product | putative hydroxylase |
Protein accession | YP_918434 |
Protein GI | 119387400 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000773199 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCA CCATTCCCGA CCTGCTGACG CCCGAGGAGG TCGCCTATAT GCGGCAGATC CTCGAAGGCA CCGCATGGGT CGATGGCCGC AGCACCGCGG GCGACCAGGC GGGCAAGGTC AAGCGGAACC TCCAGGTGCC GGTGGACAGC CCCGAGGCGC GCGAACTGGG CAATATCGTG TTGCGGGCAC TGGGCCGCAG CCCGGTCTAT TCCTCGGCCG CGCTGCCCGC GCATATCCTG CCGCCGATGT TCAACCGCTA TGACGAGGGC ATGACCTTCG GCGCCCATGT CGACGGCTCG ATCCGCGTCG TACCGGGCAC CGGCCAGCGC ATCCGCACCG ATGTCTCGAC CACCGTCTTC CTGACCCCGC CCGAGGATTA CGACGGCGGC GAACTGGTCA TGCACGACAC CTATGGCCAG CACAGCGTCA AGCTGCCGGC GGGTCATGCC GTAGTCTATC CCGCGACCTC GCTGCATTCG GTGACGCCGG TGACGCGCGG CTCGCGTTGG GCCTCGTTCT TCTGGGCGCA GTCGATGGTG CGCGACGACT GGCGCCGGCA CATGCTTTAT GACCTGGACA TGTCGATCAT GCGCATCCGC TCGATGCTGC CCGACGACGA TCCGGCGGTG ACGGGCATCA CCGCGCATTA CCACAACATG ATCCGCCACT GGGCCGAGAC CTGA
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Protein sequence | MLITIPDLLT PEEVAYMRQI LEGTAWVDGR STAGDQAGKV KRNLQVPVDS PEARELGNIV LRALGRSPVY SSAALPAHIL PPMFNRYDEG MTFGAHVDGS IRVVPGTGQR IRTDVSTTVF LTPPEDYDGG ELVMHDTYGQ HSVKLPAGHA VVYPATSLHS VTPVTRGSRW ASFFWAQSMV RDDWRRHMLY DLDMSIMRIR SMLPDDDPAV TGITAHYHNM IRHWAET
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