Gene Pden_4677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4677 
Symbol 
ID4583180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp169987 
End bp170670 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID639771981 
Productputative hydroxylase 
Protein accessionYP_918434 
Protein GI119387400 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000773199 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA CCATTCCCGA CCTGCTGACG CCCGAGGAGG TCGCCTATAT GCGGCAGATC 
CTCGAAGGCA CCGCATGGGT CGATGGCCGC AGCACCGCGG GCGACCAGGC GGGCAAGGTC
AAGCGGAACC TCCAGGTGCC GGTGGACAGC CCCGAGGCGC GCGAACTGGG CAATATCGTG
TTGCGGGCAC TGGGCCGCAG CCCGGTCTAT TCCTCGGCCG CGCTGCCCGC GCATATCCTG
CCGCCGATGT TCAACCGCTA TGACGAGGGC ATGACCTTCG GCGCCCATGT CGACGGCTCG
ATCCGCGTCG TACCGGGCAC CGGCCAGCGC ATCCGCACCG ATGTCTCGAC CACCGTCTTC
CTGACCCCGC CCGAGGATTA CGACGGCGGC GAACTGGTCA TGCACGACAC CTATGGCCAG
CACAGCGTCA AGCTGCCGGC GGGTCATGCC GTAGTCTATC CCGCGACCTC GCTGCATTCG
GTGACGCCGG TGACGCGCGG CTCGCGTTGG GCCTCGTTCT TCTGGGCGCA GTCGATGGTG
CGCGACGACT GGCGCCGGCA CATGCTTTAT GACCTGGACA TGTCGATCAT GCGCATCCGC
TCGATGCTGC CCGACGACGA TCCGGCGGTG ACGGGCATCA CCGCGCATTA CCACAACATG
ATCCGCCACT GGGCCGAGAC CTGA
 
Protein sequence
MLITIPDLLT PEEVAYMRQI LEGTAWVDGR STAGDQAGKV KRNLQVPVDS PEARELGNIV 
LRALGRSPVY SSAALPAHIL PPMFNRYDEG MTFGAHVDGS IRVVPGTGQR IRTDVSTTVF
LTPPEDYDGG ELVMHDTYGQ HSVKLPAGHA VVYPATSLHS VTPVTRGSRW ASFFWAQSMV
RDDWRRHMLY DLDMSIMRIR SMLPDDDPAV TGITAHYHNM IRHWAET