Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4660 |
Symbol | |
ID | 4583163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 152405 |
End bp | 153448 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771964 |
Product | ABC transporter related |
Protein accession | YP_918417 |
Protein GI | 119387383 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.934636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA CCAAAGCCGG CATCCGCATC GAGGATCTGC ACCTGTCGTT CGGCGACACC AAGGTGCTGG AAGGCATCGA CATGGTCATC GAGCCGGGCG AGTTCTTCGC CTTCCTCGGC CCCTCGGGCT CGGGCAAATC GACGCTGCTG CGCGCGATTG CGGGGTTCGG GCCGACACCG CGCGGGCGCA TCCTGATCGG GGATCGCGAC ATCGCGAAGC TGCCGCCGTG GAAGCGCAAC GTGGGCATGG TGTTCCAGTC CTATGCGCTG TGGCCGCATA TGTCGGTGCG CCGCAACGTG GCCTTCGGGC TTGAGGAACG CCGGATGCCC GCCCGCGAGA TCGGCCCCAG GGTCGAGCGC GCGCTGGAAA CCGTGGGCCT TTTGCACCTG GCCGACCGGA TGCCCGCGCA GCTTTCGGGC GGCCAGCAGC AGCGGGTCGC CTTGGCGCGC ACCATCGCCA TCGAGCCGCA GGTGCTGTTG CTGGACGAGC CGCTGTCGAA TCTGGACGCC GCGCTGCGGG TCCAGATGCG GCGCGAATTG TTGGCCTTGC AGCGCAAGCT GGGCCTGACG ACGATCTTCG TCACCCATGA CCAGGAAGAA GCCAACACCA CCTCGGACCG GATGGCAGTG CTGGACAAGG GCGTGATCCA GCAGATCGGC ACCCCGCAGC AGCTTTACGA CCAGCCGGCG AATGCCTTCG TCGCGGGGTT CCTTGGCACC GCGAACATCC TGAAAGGCGC CATGCAGGGG CCGGATTTCG TGACCGCGGC GGGCCAGCGC CTGCCCGTGG CCGCTCCGCT AGGGGATGCG AACCGCATCG TGCTGCGCCC GCAGAACATC CGCATCAGCG GCTCGGGCGG CGAGATTGCG GGCAGGGTGG CGCATCGCGA GTTCCTGGGC AGCCAGATCC GCTATCTGGT CGAGACCCCG GACGGCCAGA TCATCGTCGA TACGCTGCAT TCTTCCGGCC AGCCGCCTTA CGACGAAGGC GCAACCGTGT CCCTGTCCAT CGACAGCCAG AGCGCCCCCC TGCTGGCGGA TTGA
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Protein sequence | MTQTKAGIRI EDLHLSFGDT KVLEGIDMVI EPGEFFAFLG PSGSGKSTLL RAIAGFGPTP RGRILIGDRD IAKLPPWKRN VGMVFQSYAL WPHMSVRRNV AFGLEERRMP AREIGPRVER ALETVGLLHL ADRMPAQLSG GQQQRVALAR TIAIEPQVLL LDEPLSNLDA ALRVQMRREL LALQRKLGLT TIFVTHDQEE ANTTSDRMAV LDKGVIQQIG TPQQLYDQPA NAFVAGFLGT ANILKGAMQG PDFVTAAGQR LPVAAPLGDA NRIVLRPQNI RISGSGGEIA GRVAHREFLG SQIRYLVETP DGQIIVDTLH SSGQPPYDEG ATVSLSIDSQ SAPLLAD
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