Gene Pden_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4660 
Symbol 
ID4583163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp152405 
End bp153448 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID639771964 
ProductABC transporter related 
Protein accessionYP_918417 
Protein GI119387383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.934636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA CCAAAGCCGG CATCCGCATC GAGGATCTGC ACCTGTCGTT CGGCGACACC 
AAGGTGCTGG AAGGCATCGA CATGGTCATC GAGCCGGGCG AGTTCTTCGC CTTCCTCGGC
CCCTCGGGCT CGGGCAAATC GACGCTGCTG CGCGCGATTG CGGGGTTCGG GCCGACACCG
CGCGGGCGCA TCCTGATCGG GGATCGCGAC ATCGCGAAGC TGCCGCCGTG GAAGCGCAAC
GTGGGCATGG TGTTCCAGTC CTATGCGCTG TGGCCGCATA TGTCGGTGCG CCGCAACGTG
GCCTTCGGGC TTGAGGAACG CCGGATGCCC GCCCGCGAGA TCGGCCCCAG GGTCGAGCGC
GCGCTGGAAA CCGTGGGCCT TTTGCACCTG GCCGACCGGA TGCCCGCGCA GCTTTCGGGC
GGCCAGCAGC AGCGGGTCGC CTTGGCGCGC ACCATCGCCA TCGAGCCGCA GGTGCTGTTG
CTGGACGAGC CGCTGTCGAA TCTGGACGCC GCGCTGCGGG TCCAGATGCG GCGCGAATTG
TTGGCCTTGC AGCGCAAGCT GGGCCTGACG ACGATCTTCG TCACCCATGA CCAGGAAGAA
GCCAACACCA CCTCGGACCG GATGGCAGTG CTGGACAAGG GCGTGATCCA GCAGATCGGC
ACCCCGCAGC AGCTTTACGA CCAGCCGGCG AATGCCTTCG TCGCGGGGTT CCTTGGCACC
GCGAACATCC TGAAAGGCGC CATGCAGGGG CCGGATTTCG TGACCGCGGC GGGCCAGCGC
CTGCCCGTGG CCGCTCCGCT AGGGGATGCG AACCGCATCG TGCTGCGCCC GCAGAACATC
CGCATCAGCG GCTCGGGCGG CGAGATTGCG GGCAGGGTGG CGCATCGCGA GTTCCTGGGC
AGCCAGATCC GCTATCTGGT CGAGACCCCG GACGGCCAGA TCATCGTCGA TACGCTGCAT
TCTTCCGGCC AGCCGCCTTA CGACGAAGGC GCAACCGTGT CCCTGTCCAT CGACAGCCAG
AGCGCCCCCC TGCTGGCGGA TTGA
 
Protein sequence
MTQTKAGIRI EDLHLSFGDT KVLEGIDMVI EPGEFFAFLG PSGSGKSTLL RAIAGFGPTP 
RGRILIGDRD IAKLPPWKRN VGMVFQSYAL WPHMSVRRNV AFGLEERRMP AREIGPRVER
ALETVGLLHL ADRMPAQLSG GQQQRVALAR TIAIEPQVLL LDEPLSNLDA ALRVQMRREL
LALQRKLGLT TIFVTHDQEE ANTTSDRMAV LDKGVIQQIG TPQQLYDQPA NAFVAGFLGT
ANILKGAMQG PDFVTAAGQR LPVAAPLGDA NRIVLRPQNI RISGSGGEIA GRVAHREFLG
SQIRYLVETP DGQIIVDTLH SSGQPPYDEG ATVSLSIDSQ SAPLLAD