Gene Pden_4651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4651 
Symbol 
ID4583154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp140935 
End bp142038 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content67% 
IMG OID639771955 
ProductABC transporter related 
Protein accessionYP_918408 
Protein GI119387374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG TCGTTTTCCA GAATATCGTC AAGCAATTCC CCGCCGCCGG CGGGGCGCCG 
GGCGGGCTTG CGGTACAAGA CCTGGACCTG ACCATCGAGG AAGGCTCGCT GGTCACGCTG
CTGGGCCCCT CGGGTTGCGG CAAGACCACC ACGCTGCGGA TGCTCGCGGG GTTCGAGACG
CCCACCTCGG GCCGCATCAC CATCGGCGGG CGCGACGTGA CGCATCTGCC GGTCAATGCC
CGCAATGTCG GCATGGTGTT CCAAAGCTAT GCGCTGTTTC CGCACATGAC CGTGCGCCAG
AACGTCGAAT ACGGTGCCAA GCTGCAGAAC CTCTCGAAGG CCGAACTGAA CAGCCGCGTG
GACGAGATGC TCGAGACCAT GGCGCTGACC CCCTATGCCG ACCGCGCGCC CTCGCGCCTG
TCGGGCGGCC AGCAGCAGCG CGTGGCGCTG GCCCGCGCCG TGGTCACCCG GCCCAAGGTG
CTGCTCTTCG ACGAGCCGCT GTCGAACCTC GATGCGCAGC TGCGCGAGCG GATGCGGGAC
GAGTTGCGGG CGATCCAGCT GCGCCTGGGC ATCACCAGCC TTTACGTCAC TCATGACCAA
AGCGAGGCGA TGGCGATTTC CGACCGCGTC GTGGTGATGC GCAACGGCGT CGTCGAACAG
GCCGACACGC CGATGAACGT CTATGCCCGC CCCGGCACCG CCTTCGTGGC CGAGTTCATG
GGCAAGGCCA ATATCCTCGA GGGCGAGGTG CAGGAAATCG GCGAGGCGAC CGTACGCACC
CGCATCGCCG GCGCCAGTTT CGAGCTGCCG CGCGGTCCGC ATCCCTTGCG CCCCGGCCAG
CGCGTGCGCT GCGTGCTGCG GCCCGAATAC CTGCGCATCG ATCCGCAGGG CCCGCTGACC
GCCACCGTCA AGCGCGTCGT CTTCCAGGGT GGCCATGTCG AGTACCTGAC CGAGATCGGC
GGGCAGGAAT GCACCGTCAC CGACGCGCAA TATTTCCACG GCGGCATCGC CGAACAGGGC
CGGCCGCTGC GGCTGGCGCT GGACACAAGG CCGGTCTGGA TGCTGGCCGA CGACCAAAAC
ACGAACGCAT TGAAAGCAGC CTGA
 
Protein sequence
MSNVVFQNIV KQFPAAGGAP GGLAVQDLDL TIEEGSLVTL LGPSGCGKTT TLRMLAGFET 
PTSGRITIGG RDVTHLPVNA RNVGMVFQSY ALFPHMTVRQ NVEYGAKLQN LSKAELNSRV
DEMLETMALT PYADRAPSRL SGGQQQRVAL ARAVVTRPKV LLFDEPLSNL DAQLRERMRD
ELRAIQLRLG ITSLYVTHDQ SEAMAISDRV VVMRNGVVEQ ADTPMNVYAR PGTAFVAEFM
GKANILEGEV QEIGEATVRT RIAGASFELP RGPHPLRPGQ RVRCVLRPEY LRIDPQGPLT
ATVKRVVFQG GHVEYLTEIG GQECTVTDAQ YFHGGIAEQG RPLRLALDTR PVWMLADDQN
TNALKAA