Gene Pden_4649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4649 
Symbol 
ID4583152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp138208 
End bp139215 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID639771953 
Productextracellular solute-binding protein 
Protein accessionYP_918406 
Protein GI119387372 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC CACTCGCGCT GTCTTCAGCG CTTGCCTTGC TATGCTCGGT CGCCAGTGCC 
CAGGCGGCGC CGCTGACGGT CTATTGCCCG ATGTCGGATG ACGATTGCGG CTCGGTCTTG
GCGGCCTTTG CCGCCGATAC CGGAAACGAG GCGCGCTTTG TCCGCATCGG CGCAGGCGAG
ATCCTGGCCC GCATCCGGGC CGAGAAGGCC AATCCGCAGG CCGGGCTGTG GCTGGCCGGC
GCCGCCGACA ATTTCATCCA GGCGGCCGAG GAGGGACTCC TGGCGCCGCA CAAGGCGGCC
GGCATCGACA AGGTCGATCC GCGCTTTGCC GACAAGGACG GCGCCTGGAC GCCGATTTCC
ATGTCGCCGC TGGTCTTCGC CTATAACGCC GATCTGGTGG AGGAAGCGCA GGCGCCGATC
CCCGACAGCT GGACGAGTTT CGCCGACCCG GCCTATCAGA AGAACGTCGC GCTGGCCCAT
GCCGCGTCCT CGGGCACGGC CTATGTCGCA CTGGCCTCGG TCGTGCAGCT TTCCGGCGAG
GACGAGGGCT TCCAGCTGAT GAAGGACATC GACAAGAACG TCATCCAGTA TACCCGCTCG
GGCGTCGCGC CCTCGCGCAT GGTCGCGAAT GGCGAGGTGG CGCTGGCCAT GGCCTTTACC
CAGGATGTCG AGGCGGCGCT GGCTGCCGGC TATCCGCTGG ACTATGCCTT CCCGAAAGAG
GGCACCGGCT TCGAGGTGAA CGCCGCCGCC GCCGTCGCCA ATGCGCCCGA GGACCAGGCC
ACGGCCGCCA CCGCCTTCCT GGACTGGGTG CTGACCGAAA AGGGCCAGGC CGCCATGGGC
GCCACCTTCC GCGGCCCGAT CGTGCCCGGC TATGTCAACC CCGAGGCCAG GATCGACCTC
AGCAACGTCA AGCTGATCGA TTACGATTTC GCCTGGGCCG GTGCCAACCG CGCCCGCCTG
CTAGAGCGTT ACGAGAACGA AGTCCGCCAC AAGGCCGACG CCCAGTAA
 
Protein sequence
MKRPLALSSA LALLCSVASA QAAPLTVYCP MSDDDCGSVL AAFAADTGNE ARFVRIGAGE 
ILARIRAEKA NPQAGLWLAG AADNFIQAAE EGLLAPHKAA GIDKVDPRFA DKDGAWTPIS
MSPLVFAYNA DLVEEAQAPI PDSWTSFADP AYQKNVALAH AASSGTAYVA LASVVQLSGE
DEGFQLMKDI DKNVIQYTRS GVAPSRMVAN GEVALAMAFT QDVEAALAAG YPLDYAFPKE
GTGFEVNAAA AVANAPEDQA TAATAFLDWV LTEKGQAAMG ATFRGPIVPG YVNPEARIDL
SNVKLIDYDF AWAGANRARL LERYENEVRH KADAQ