Gene Pden_4598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4598 
Symbol 
ID4583337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp81033 
End bp82232 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content68% 
IMG OID639771904 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_918357 
Protein GI119387323 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC CCGGATCGCT CGCCAATCTT CGGGTCATCG ACGCCAGCCG CGTGCTGGGC 
GGTCCCTATG CCGGCCAGAT ACTGGCCGAT CACGGCGCCG ATGTCGTCAA GCTGGAACCC
CCTGCAGGCG ACGAGACGCG CGGCTGGGGC CCGCCCTTCC TGGGCGATGC GGCCAGCTAT
TTCCTGGGCC TGAACCGCAA CAAGCGCGGC ATCGCCGTGG ACCTGTCGCA AGAGATGGGG
CGCGAGTTGC TGCTGGCGCT GCTGGAAGAC GCCGATGTGC TGATCGAGAA TTTCAAGACC
GGCACGATGG AACGCTGGGG CCTGGGCCAG GACGAACTTG CAAGGCGCTT CCCGCGGCTG
GTGCATTGCC GCGTCTCGGG CTTCGGTGCG GACGGGCCGA TGGGCGGGCT GCCGGGCTAC
GACGCCGCGA TCCAGGCGCT TTGCGGCATC ATGAGCGTGA ATGGCGAGGC GGGTGGCCAG
CCGCTGCGCG TGGGCCTGCC GGTGGTGGAC ATGGTGACGG GCCTCAACGC CACCATCGGC
ATCCTCATGG CGCTGAGCGA GCGCGCGACC AGCGGCAAGG GCCAGTTCGT CGAGACCAGC
CTTTACGATT GCGGCGTCTC GCTGCTGCAT CCGCATTTGC CCAACTACTA CCTTTCGGGC
AGGGTGGCGG GGCCCTCGGG CAATGCGCAT CCCAACATCT GCCCCTATGA CACATTCGCC
ACCGGGACCG AGCCGATCTT TCTCGCCGTC GGCAACGATC GGCAATTCGC CACGCTCTGC
GCCATGATCG GCCGGCCCGA CCTGCCGCAG GACGCGCGCT TTGCCAGCAA CAGCCAGCGC
AACATCCACC GAGACGCGCT GAAGGCGGCG CTGGAAGCGG CGCTTTCCGC CTTCGATTGC
GCCGGGCTTT CCGACCGGCT GATCAAGGCC GGCGTGCCCT GCGGTGCGGT GCGCAGCATC
GACCAGGTGA TCGCCGACCC GCATACGATC CACCGCGAGA TGGTGGTGGA TATCGGCGAG
TATCGCGGCA CTGGCAGCCC GATCAAGCTG TCGCGCACGC CCGCCAGCTA TCGCCGCGCG
CCGCCCGGCT TTGCCCAGCA CACGGGCGAA GTCATGGCGG AACGCGCGCT GGACCCCGAC
AGCTATCGCG AGGTGCTGCC GGGTCCGGAC CCCGAACAGA ACGCCGCGAG GAAAGCATGA
 
Protein sequence
MINPGSLANL RVIDASRVLG GPYAGQILAD HGADVVKLEP PAGDETRGWG PPFLGDAASY 
FLGLNRNKRG IAVDLSQEMG RELLLALLED ADVLIENFKT GTMERWGLGQ DELARRFPRL
VHCRVSGFGA DGPMGGLPGY DAAIQALCGI MSVNGEAGGQ PLRVGLPVVD MVTGLNATIG
ILMALSERAT SGKGQFVETS LYDCGVSLLH PHLPNYYLSG RVAGPSGNAH PNICPYDTFA
TGTEPIFLAV GNDRQFATLC AMIGRPDLPQ DARFASNSQR NIHRDALKAA LEAALSAFDC
AGLSDRLIKA GVPCGAVRSI DQVIADPHTI HREMVVDIGE YRGTGSPIKL SRTPASYRRA
PPGFAQHTGE VMAERALDPD SYREVLPGPD PEQNAARKA