Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4598 |
Symbol | |
ID | 4583337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 81033 |
End bp | 82232 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771904 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_918357 |
Protein GI | 119387323 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC CCGGATCGCT CGCCAATCTT CGGGTCATCG ACGCCAGCCG CGTGCTGGGC GGTCCCTATG CCGGCCAGAT ACTGGCCGAT CACGGCGCCG ATGTCGTCAA GCTGGAACCC CCTGCAGGCG ACGAGACGCG CGGCTGGGGC CCGCCCTTCC TGGGCGATGC GGCCAGCTAT TTCCTGGGCC TGAACCGCAA CAAGCGCGGC ATCGCCGTGG ACCTGTCGCA AGAGATGGGG CGCGAGTTGC TGCTGGCGCT GCTGGAAGAC GCCGATGTGC TGATCGAGAA TTTCAAGACC GGCACGATGG AACGCTGGGG CCTGGGCCAG GACGAACTTG CAAGGCGCTT CCCGCGGCTG GTGCATTGCC GCGTCTCGGG CTTCGGTGCG GACGGGCCGA TGGGCGGGCT GCCGGGCTAC GACGCCGCGA TCCAGGCGCT TTGCGGCATC ATGAGCGTGA ATGGCGAGGC GGGTGGCCAG CCGCTGCGCG TGGGCCTGCC GGTGGTGGAC ATGGTGACGG GCCTCAACGC CACCATCGGC ATCCTCATGG CGCTGAGCGA GCGCGCGACC AGCGGCAAGG GCCAGTTCGT CGAGACCAGC CTTTACGATT GCGGCGTCTC GCTGCTGCAT CCGCATTTGC CCAACTACTA CCTTTCGGGC AGGGTGGCGG GGCCCTCGGG CAATGCGCAT CCCAACATCT GCCCCTATGA CACATTCGCC ACCGGGACCG AGCCGATCTT TCTCGCCGTC GGCAACGATC GGCAATTCGC CACGCTCTGC GCCATGATCG GCCGGCCCGA CCTGCCGCAG GACGCGCGCT TTGCCAGCAA CAGCCAGCGC AACATCCACC GAGACGCGCT GAAGGCGGCG CTGGAAGCGG CGCTTTCCGC CTTCGATTGC GCCGGGCTTT CCGACCGGCT GATCAAGGCC GGCGTGCCCT GCGGTGCGGT GCGCAGCATC GACCAGGTGA TCGCCGACCC GCATACGATC CACCGCGAGA TGGTGGTGGA TATCGGCGAG TATCGCGGCA CTGGCAGCCC GATCAAGCTG TCGCGCACGC CCGCCAGCTA TCGCCGCGCG CCGCCCGGCT TTGCCCAGCA CACGGGCGAA GTCATGGCGG AACGCGCGCT GGACCCCGAC AGCTATCGCG AGGTGCTGCC GGGTCCGGAC CCCGAACAGA ACGCCGCGAG GAAAGCATGA
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Protein sequence | MINPGSLANL RVIDASRVLG GPYAGQILAD HGADVVKLEP PAGDETRGWG PPFLGDAASY FLGLNRNKRG IAVDLSQEMG RELLLALLED ADVLIENFKT GTMERWGLGQ DELARRFPRL VHCRVSGFGA DGPMGGLPGY DAAIQALCGI MSVNGEAGGQ PLRVGLPVVD MVTGLNATIG ILMALSERAT SGKGQFVETS LYDCGVSLLH PHLPNYYLSG RVAGPSGNAH PNICPYDTFA TGTEPIFLAV GNDRQFATLC AMIGRPDLPQ DARFASNSQR NIHRDALKAA LEAALSAFDC AGLSDRLIKA GVPCGAVRSI DQVIADPHTI HREMVVDIGE YRGTGSPIKL SRTPASYRRA PPGFAQHTGE VMAERALDPD SYREVLPGPD PEQNAARKA
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