Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4590 |
Symbol | |
ID | 4583329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 71280 |
End bp | 72935 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771896 |
Product | acyl-CoA synthetase |
Protein accession | YP_918349 |
Protein GI | 119387315 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.907923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT ACGACGAGGG GCTGGAACGA GCGGCGGCCA ACCACCAGCC GATGACGCCC ATATCCTATC TGCGGCGGAC GGCGCGGATC CATCCCGACC ACCCGGCGGT GATCCATGGC CGCCAGCGCC ACGGCTATGC CCGGCTCTGG GCCGATTGCT GCCGGCTGGC CTCGGCGCTG CTGGGCCGGG GGATCGGCCG GGGGGATACC GTCTCGGTCC TGCTGTCGAA CACGCCGCCG ATGATCCACG CCCATTTCGG CGTGCCGATG GCCGGGGGCG CGGTGCTGCA TTCGATCAAC ACCCGCTCCG ATCCCGCCAC CGTGGCGTTC CAGCTGGACC ACGCGGAAAG CCGCGTCCTG ATCGTGGATC GCGAGTTCTC GGCAATGGCC GCCGAGGCGC TGGCCCTGGC CGGGGTGCGG CCGCTGGTCG TCGACTTCGA CGATGCCGAA TATCCCGACG ATGCCCCCCA TCCCAAGGGC GAACCCATCG GCAGCCTCGA CTATGAGCAG CTGCTGGCCG AGGGCGACCC GGATTTCGCC GCCACCCCGC CCGGCGACGA ATGGGACGCG ATCTCGCTGA ACTATACCTC GGGGACCACC GGCAATCCCA AGGGCGTCGT CTACCACCAT CGCGGTGCGG CGCTGATGGC GTTGAACAAC GTCATCCATG CCGGGATGGG CCGGCATCCG GTCTATCTGT GGACCCTGCC GATGTTTCAC TGCAACGGCT GGTGCTTTCC CTGGACGGTG CCGGTGCAGG CGGGCACGCA GGTCTGCCTG CGCTGGGTCC GGGCGGGGGC GATCTTCGAC GCCATCGCGG ATCACGGCGT CACGCATCTG TGCGGGGCGC CCATCGTTAT GTCCACGCTG CTGAACGCTG CGGCCGACCG GAAACGCGGC TTTCCGCAGC AGGTGACGTT CAACACCGCC GCCGCGCCGC CGCCCGAGAC GGTGCTGCAG GCCATGGCGA AGGCCGGCTT CGGGGTCACC CATCTTTACG GCCTGACCGA GACCTATGGC CCGGCCGTGG TGAACGAATG GAATCCCGGT TGGGACGGCT TGCCGCCTTC CGGGCAGGCG GCGCGCAAGG CCCGGCAGGG CGTGCGCTAC CTGTCGCTGG ACGAACTGGC GGTGATGGAC CCCGAAACCC TGCAGCCCGT GCCCGCCGAC GGCCGGACGC TGGGCGAGGT GATGTTTCGC GGCAATGTGG TGATGAAGGG CTATCTGAAG AACCCCGAGG CCACGGCGGC GGCCTTTGCC GGCGGCTGGT TCCATTCCGG CGACCTGGCG GTGATGCATC CCGACGGCTA TGTCCAGCTC AAGGACCGCT CCAAGGACAT CATCATCTCG GGCGGCGAGA ACATCTCCTC GATCGAGGTC GAGGAACAGC TCTACCGCCA TCCCGCCGTC GCGCTTTGCG CCGTGGTCGC CATGCCCAGC GAGAAATGGG GCGAGACCCC CTGCGCCTTC GTGGAGCTGC GCGAGGGCGG CGAGGAGACC GAGCCCGGCC TGATCGCGCA TTGCCGCGCC GGGCTTGCGG GCTACAAATG CCCGTCGCGG GTGGTGTTCG GGCCGCTGCC CAAGACCTCG ACCGGCAAGA TCCAGAAGTT CGCCCTGCGT GCGCGGGCGG CGGAACTGGC GCGGGCAATG ACCTGA
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Protein sequence | MTEYDEGLER AAANHQPMTP ISYLRRTARI HPDHPAVIHG RQRHGYARLW ADCCRLASAL LGRGIGRGDT VSVLLSNTPP MIHAHFGVPM AGGAVLHSIN TRSDPATVAF QLDHAESRVL IVDREFSAMA AEALALAGVR PLVVDFDDAE YPDDAPHPKG EPIGSLDYEQ LLAEGDPDFA ATPPGDEWDA ISLNYTSGTT GNPKGVVYHH RGAALMALNN VIHAGMGRHP VYLWTLPMFH CNGWCFPWTV PVQAGTQVCL RWVRAGAIFD AIADHGVTHL CGAPIVMSTL LNAAADRKRG FPQQVTFNTA AAPPPETVLQ AMAKAGFGVT HLYGLTETYG PAVVNEWNPG WDGLPPSGQA ARKARQGVRY LSLDELAVMD PETLQPVPAD GRTLGEVMFR GNVVMKGYLK NPEATAAAFA GGWFHSGDLA VMHPDGYVQL KDRSKDIIIS GGENISSIEV EEQLYRHPAV ALCAVVAMPS EKWGETPCAF VELREGGEET EPGLIAHCRA GLAGYKCPSR VVFGPLPKTS TGKIQKFALR ARAAELARAM T
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