| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4508 |
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| Symbol | |
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| ID | 4583058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1722683 |
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| End bp | 1724461 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771815 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_918268 |
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| Protein GI | 119387213 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.951327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGCT TTGAACTGAC CGGAACCAAT GCGGCGATCG CGATGCTGCT CATCGTGGTC
GTCATGTTCA TCGAGTTCAT TCGCGAAAAG CGCCCGCCCG AGGTGGTGGC CATCGGCACC
GCCGCCGTGA TGATGGTGCT GGGCCTCTTG CCGATCAAGG ACGCCGCCGG CGTGCTGTCG
AACTCGGCGC CCTGGACCAT CGCCTTCATG TTCCTGATCA TGGGCGGGCT GATGCGCACC
GGCGCGCTGG AAATCATGTC GCGGCTCGTC ACCATGCGGG CGGCGAGCCA TCCGCGTTTC
ACCATCGGCG CGCTGTTCCT GTTCGTGATC GTGGCCTCGG CGATCATGAA CAATACGCCG
GTGGTGGCGG TGATGATCCC GATCTTCATC CAGCTGGCGC TGCGGCTGGG GCTCTCGCCG
TCGAAGCTGC TGATGCCGCT GAGCTATTTC ACCATCCTGG GCGGGATGAT GACGTTGATC
GGCACCTCGA CCAACCTGCT GGTGGACGGC GTGGCGCGCG AGCAGGGCAT GGCGCCCTTC
ACCATCTTCG AGATCGCCCC GGTCGGTGTC GCCATCACGC TTGCCGGCGT CCTCTATTTC
GCGCTCCTGG GCAAGCGATT GCTGCCCGAT CGCACCTCGC TGGCGGGCTT TCTCGGCACC
CGGCGCGAGA TGAAATATTT CACCGAGGTC GCCATCCCCG AGGATTCCAG CCTGGTCGGC
CAGCCGGTCC TGACGGCGCC GATCTTCAAG CGCGATGCGG TGCGGGTGAT CGACGTGCTG
CGCGGCGATG CCTCGCTGCG GCGCAACCTG GCCGAGGTGG TGCTGGAGCC GGGCGACCGG
GTCGTGCTGC GCTCGGAAAT GGCCGACCTG CTGGAAATGC AGTCCAACAA GAACTTCCAG
ATGGTGGACA AGCTGAGCTC GGTCGCCACC GAGACGGTCG AGGTGCTTAT TTCGCCGGGC
GCGCGGCTGG TCGGGCGGCG GCTTGGCGAC ATGCGCCTGC GCCGGCGCTA TGGCGTCTAC
GTTCTGGCCG CGCATCGCCG CAGCCAGAAC ATCGGCCGCC AGCTCGACGA TCTGGTGGTG
CAGGTCGGCG ACACGCTGCT GCTGGAAGGC GCGCCCGAGG ATATCGGGCG GCTCGCCGCC
GACATGGAGC TGGTCGATGT CTCGCGCCCC TCGGCCCGGC CGTTCCGGCG CGAGCGCGCG
CCGATCGCGA TCCTGTCCCT CTTGGCGGTG GTGTCGCTGG CGGCTCTGGA CGTCGCGCCG
ATCATGGCGC TGTCCTTTCT GGCGGCGGCG ATGGTCCTGA TCACCCGCTG CGTCGATGCC
GAGGAGGCCT TCGCCTTTGT CGACGCCCGG CTGATGGCGA TGATCTTCGC CATGCTGGCG
GTGGGCGAGG CGCTGGAGCA TACCGGAACG GTCACTCTGG TGGTGGATGC GGTGGCCCCG
CATCTTGCCG GCCTGCCGCC CTTTGCGACG CTGATCGCGG TCTATTTCCT TGGCCTGGTC
ATGACCGAGG TGTTGTCGAA CAATGCCGTC GCGGTGCTTT TGACGCCGGT GGCCATCGCG
CTGGCGAAAT CGCTGGGCCA CGATCCCCGT GCCTATGTCG TGGCGGTGAT GTTCTCGGCC
ACGGTCGCCT TCGCCACGCC CATCGGCTAT CAGACCCACC TGATGGTCTA TGGCCCCGGC
GGCTACAGGT TCAGCGACTT CGTCAAGGTC GGTGTGCCCC TGGACATCAT CTGCGGCATC
GTCGCCTGCC TGACCATCCC GCTGTTCTGG CCGCTGTGA
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| Protein sequence | MLGFELTGTN AAIAMLLIVV VMFIEFIREK RPPEVVAIGT AAVMMVLGLL PIKDAAGVLS
NSAPWTIAFM FLIMGGLMRT GALEIMSRLV TMRAASHPRF TIGALFLFVI VASAIMNNTP
VVAVMIPIFI QLALRLGLSP SKLLMPLSYF TILGGMMTLI GTSTNLLVDG VAREQGMAPF
TIFEIAPVGV AITLAGVLYF ALLGKRLLPD RTSLAGFLGT RREMKYFTEV AIPEDSSLVG
QPVLTAPIFK RDAVRVIDVL RGDASLRRNL AEVVLEPGDR VVLRSEMADL LEMQSNKNFQ
MVDKLSSVAT ETVEVLISPG ARLVGRRLGD MRLRRRYGVY VLAAHRRSQN IGRQLDDLVV
QVGDTLLLEG APEDIGRLAA DMELVDVSRP SARPFRRERA PIAILSLLAV VSLAALDVAP
IMALSFLAAA MVLITRCVDA EEAFAFVDAR LMAMIFAMLA VGEALEHTGT VTLVVDAVAP
HLAGLPPFAT LIAVYFLGLV MTEVLSNNAV AVLLTPVAIA LAKSLGHDPR AYVVAVMFSA
TVAFATPIGY QTHLMVYGPG GYRFSDFVKV GVPLDIICGI VACLTIPLFW PL
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