Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4411 |
Symbol | |
ID | 4582961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1611443 |
End bp | 1612588 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639771718 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_918171 |
Protein GI | 119387116 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.544796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCAGC CGGCATTGCA GGGGCTGCGC GTCGTCGAAC TGGCGCGCAT CCTGGCCGGG CCGTGGATCG GCCAGACGCT GGCCGATCTG GGCGCCGAGG TCATCAAGGT CGAGGCGCCC GAGGGCGACG ACACCCGCCG CTGGGGCCCG CCCTTCATCG AGCGGCCGCG CGCCGACGGG ACGACCGAAC GGGTCGCGGC CTATTTCCAC GCCGCCAATC GCGGCAAGCG CTCGGTGACT TGCGACTTCA ACGATCCCGC TGATCTGGAG CGCCTGCGGG CGCTGATCGA CCAGGCCGAC GTGGTGATCG AGAATTTCAA GCTGGGCGGA TTGCGCAAGT TCGGGCTGGA CTACCAGACG CTTTCGGCAC GCAATCCGCG GCTGGTCTAT GCCTCGATCA CCGGCTTCGG GCAGGACGGG CCGCGGGCGG CGCAGCCGGG CTATGATTTC CTGATCCAGG GCATGTCGGG CATCATGGAC CTGACCGGCG ATCCGCAGGG CGAGCCGCAG AAGGTCGGCG TGGCCTGGAT CGACATCTTC ACCGGGCTTT ACGGGGTGAT CGCCGTGCAG GCGGCGCTGG CCGAGCGGGC GCGGTCGGGC CTGGGCCAGC ATCTGGACCT GTCGCTGCTG GATTGCGGGG TGGCGGTGCT GGCCAACCAG GCGACGAACT ACCTGCTGGG CGGCGCGGTG CCGCACCGGC TGGGCAATGC GCATCCCAAC ATCGTGCCCT ATCAGCTGTT CCCGGCCTCG GACGGGCATC TGATCGTCGC CTGCGGGAAT GACCGTCAGT TTGCAGCGCT GTGTCGAGTG CTGGAACTGC CCACACTGGC GGATGACCCG GACTTTGCCA CCAACCCCGC GCGGGTGGCG AACCGTGCGC GGCTGGTGCC GCTCTTGGCC GAAGCCACGC GCCGTTTCGC CCGCTCTGCG CTGATCGCCG CGCTGGAAGG GGCGGGTGTC CCCGCCGGCC CGGTCAACGA CGTGGCCGAG GCCCTGGCCG AGCCGCAGGT CCAGGCCCGC GCCCTGCGCA TCGCGCCCGA GGGCATCGCC GGGCTGCGCA GCCCGTTGCG CTTTTCGCGC AGCCCGCTGG TGACCGAACG CGCGGCCCCG GCGCTTGGCG ATGGCGAATG GCGCTTTGAG GGCTGA
|
Protein sequence | MDQPALQGLR VVELARILAG PWIGQTLADL GAEVIKVEAP EGDDTRRWGP PFIERPRADG TTERVAAYFH AANRGKRSVT CDFNDPADLE RLRALIDQAD VVIENFKLGG LRKFGLDYQT LSARNPRLVY ASITGFGQDG PRAAQPGYDF LIQGMSGIMD LTGDPQGEPQ KVGVAWIDIF TGLYGVIAVQ AALAERARSG LGQHLDLSLL DCGVAVLANQ ATNYLLGGAV PHRLGNAHPN IVPYQLFPAS DGHLIVACGN DRQFAALCRV LELPTLADDP DFATNPARVA NRARLVPLLA EATRRFARSA LIAALEGAGV PAGPVNDVAE ALAEPQVQAR ALRIAPEGIA GLRSPLRFSR SPLVTERAAP ALGDGEWRFE G
|
| |