| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4405 |
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| Symbol | |
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| ID | 4582955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1601479 |
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| End bp | 1602825 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771712 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_918165 |
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| Protein GI | 119387110 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.851623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.211367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC GCGTGCTTCT GGTCGAGGAT GACGAGCAGA TGCGCAGCTC GACCGCGCAG
GCGCTGGAAC TGGCGGGGTT CACCGTCGAG GCGCTGGCCT CGGGCGAGGA GGCATTGGCG
CTGGCCGGTT CGGGCTTTGC CGGCGCGGTG GTCAGCGACA TCCGCATGCC GGGCATGGAC
GGGATGACGC TGCTGGGCCG GCTGCACGAG GTCGATCCCG AGATCCCGGT GATTCTGGTC
ACCGGCCATG CCGAGGTGCC GCTGGCGGTC GAGGCGATCC GGGGCGGCGC CTATGACTTC
ATCGAGAAGC CCTTCGTGGT GCAGGAACTG GCCACGGTGA TCCGCCGCGC CATCGACCAT
CGCGGGCTGG TGCTGGAAAA CCGCCGGCTG CGCGCCGTCG CGGGCAAGCG CGACGATGTC
GAGGCCCGGC TGCCCGGCCG CACCCAGGTC ATGGTGGACC TGCGCTATCG GTTGCGCGCC
ATCGGCGCCT CTGATGCCGA TGCGCTGGTG ATCGGCCCGA CCGGCGCCGG GAAAGAGGTG
GTGGCGCGCA CGCTGCACGA CATTTCGGCC CGTGCCGGCC GGCCCTTCAT CGCCATCAAC
TGCGCTGCCC TGCCCGAGGC GCTGATCGAA AGCGAGCTGT TCGGCCATGA GCCGGGGGCC
TTTCCCGGTG CGCTGCGGCC GCGATACGGC AAGTTCGAAC ATGCGCGCGG CGGCACGGTG
CTGCTGGACG AGATCGGCTC GATGCCCCTG GAATTGCAGG CCAAGCTGCT GCGGGTGCTG
CAGGAACGCA CGATCACCCG GCTCGGCTCG AACGACCCGG TGCCGCTGGA CGTGCGCTTC
ATCGCCGTCA GCAAGGTCGA TCTGGAGGAA CTGGTCGCGC AGGGCCTTTT CCGCGAGGAC
CTGCTGTGGC GGCTGAACGT CGCCGTGCTG CATGTCCCGC CGCTTTCGGC GCGGCGCGAG
GACATCCCGC TGCTGTTCCT GCAATTGCTG CGCGAGGCCG CCGCCCGCCA CAACCTGCCC
GAGCGCGAGG CGCCCGCCGC CTTCCTGTCG GGCCTTGCGG CCAAGGAATG GCCGGGCAAT
GTGCGCGAGC TGCGCAACCT GGCCGAGCGT TTCGTGCTGG GACTGGAAGG CGCCGAGCTT
GGCCCCGAAC AGGGTGCGCG CCTGGCCGAG CGCGTGGCCG AGTTCGAGCG CAGCCTGATC
GCCGGAGCCA TCGCCGCCCA TGGCGGCAAG CTGCGCCCGG TCTATGAGAC GCTGGGTATT
TCGCGCAAGA CTCTCTACGA GAAGATGCAG AAATACGGCC TCGACCGCCG CCTGATCCTG
GATGCGGCCG AGGACGATGC CGGCTGA
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| Protein sequence | MTPRVLLVED DEQMRSSTAQ ALELAGFTVE ALASGEEALA LAGSGFAGAV VSDIRMPGMD
GMTLLGRLHE VDPEIPVILV TGHAEVPLAV EAIRGGAYDF IEKPFVVQEL ATVIRRAIDH
RGLVLENRRL RAVAGKRDDV EARLPGRTQV MVDLRYRLRA IGASDADALV IGPTGAGKEV
VARTLHDISA RAGRPFIAIN CAALPEALIE SELFGHEPGA FPGALRPRYG KFEHARGGTV
LLDEIGSMPL ELQAKLLRVL QERTITRLGS NDPVPLDVRF IAVSKVDLEE LVAQGLFRED
LLWRLNVAVL HVPPLSARRE DIPLLFLQLL REAAARHNLP EREAPAAFLS GLAAKEWPGN
VRELRNLAER FVLGLEGAEL GPEQGARLAE RVAEFERSLI AGAIAAHGGK LRPVYETLGI
SRKTLYEKMQ KYGLDRRLIL DAAEDDAG
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