Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4390 |
Symbol | |
ID | 4582940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1584318 |
End bp | 1585205 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639771697 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918150 |
Protein GI | 119387095 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.117002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA CCCAGAACAA CCGTGCCTGG CTGCTGGTCC TGCCGGTGCT GGTCGTCGTC GCCTTCTCGG CGGTGATCCC GCTGATGACG GTGGTGAACT ATTCGGTGAA CGACACCTTC GGCAACAACG CCTTCTTCTG GGCGGGCCTC GAATGGTTCG ACGAGATGGT GCATTCCCGC CGCCTGCACG AGGCGCTGGG GCGGCAGGCG CTGTTTTCCG CGATCATCCT GGCGATCGAG GTGCCGCTGG GCATCTTCGT GGCGCTGAAC ATGCCCAAGA AGGGCTTCTG GTCCAGCCTG GTGCTGGTGC TGATGGCGCT GCCCCTGCTG ATCCCCTTCA ACGTGGTGGG CACGATCTGG CAGATCTTCG GCCGCACCGA TATCGGCCTT CTGGGCCATA CGCTCAAGGC GCTGGGGCTC GACTACAACT ACACCAACGA TCCCCTGGAC GCCTGGATCA CCGTGATCGT CATGGATGTC TGGCACTGGA CCAGCCTTGT CGCGCTGCTC TGCTATGCCG GGCTGCAATC CATCCCGCAG GCCTATTACC AGGCCGCCCG GATCGACCAG GCCAGCCGTT GGGCGGTGTT CCGCCATATC GAGCTGCCCA AGATGAAGGG CGTGCTGCTG ATCGCCGTGC TGCTGCGCTT CATGGACAGC TTCATGATCT ATACCGAGCC CTTCGTGGTG ACCGGCGGCG GTCCCGGCAA CTCGACCACC TTCCTGTCCA TCGACCTGGT CAAGATGGCG GTCGGGCAGT TCGACCTTGG TCCCGCCGCC GCCTTCTCGA TCATGTATTT CCTGGTGATC CTGCTGGTCT CATGGGTGTT CTACACCGTC ATGACCAATA TCGACCGCAG CCAGTCCGAC ATCCCGGAGG CCATGTGA
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Protein sequence | MEKTQNNRAW LLVLPVLVVV AFSAVIPLMT VVNYSVNDTF GNNAFFWAGL EWFDEMVHSR RLHEALGRQA LFSAIILAIE VPLGIFVALN MPKKGFWSSL VLVLMALPLL IPFNVVGTIW QIFGRTDIGL LGHTLKALGL DYNYTNDPLD AWITVIVMDV WHWTSLVALL CYAGLQSIPQ AYYQAARIDQ ASRWAVFRHI ELPKMKGVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNSTT FLSIDLVKMA VGQFDLGPAA AFSIMYFLVI LLVSWVFYTV MTNIDRSQSD IPEAM
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