Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4352 |
Symbol | |
ID | 4582902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1539330 |
End bp | 1541114 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771659 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_918112 |
Protein GI | 119387057 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TGACGAAAGT GAGCACCGCC GTCGATCCGA TCACCCTTCA GGTCATTCGC GGCAGTTTGG AGACCATCGC CGAGGAAATG GGGCATGTGC TTTATCGCAT GTCGTTTTCG TCGATCATCC GGGAAAGCCA AGATCTTGGC GCGGGCCTGT TCGACGTGGA TTTCAACACG CTTTGCGAGT CGGAATCGAC GCCCATGCAT ATCGGCTCGA TCCCCGGCTA CCTGCGCGGC ATCGCCGAGA CGCTGGAGGA CGGCGAATGG TATGAGGGCG ACGTGGTCGT CCACAACCAC CCCTATCACG GCGCCAGCCA CACGCCCGAC CTTGCCATCG TCGTGCCGGT GTTCTTCCGC GGCCGCCTTG TCGGCTTTGC CGGGAACACC GCGCATCACG TCGATATCGG CGCGGCGACG CCCGGCCTGA TCATCGACGT GCCCGACGTC TATGCCGAGG GGATGCTGTT CGCCGGCACC AAGCTTTATC GCAAGGGCGA GCCGAACAAT GCGATGTGGA ACTATATCCG CCGCAATTCC CGCGCGGCGG GGCAGCTCGT CGCCGATATC GAGGCGCAGA TCGCCTCGGC GCGCCTGGGC GCCCGCCGCT TTGCCGAGCT GCTGGACAAA TACGGCGAGG AGACCGTCTT CGCCGCCGCC AACCAGTTGA TGGATTATGC CGAGCGGATG ATCCGCCAGC GCATCGGCGA GATCCCGGAC GGCGATTACG TCGCCGAGGG CTGGCTGGAC GACGACGGGC GCAACCGCGA CCGGCGGCTG AAGGTCAAGG TCACGGTCCG GGTGCGCGGC GACGAGGTCG AGGTGGACCT GACCGGCTCG GCCGACCAGA CCCCCACCGC CTATAACGTG CCCTTCGAGG GCTCGACCAA GGTTGCGGCC TATGCGGGTT TCCGCAAGCT CCTGCTGGAT GCCGCGACCT CCGAGGTCCG GGTGCCCTCG AACGAGGGTT CGTTCCGGCC GATCAAGGTG ACGGCGCCGC TGGGCTCGAT CTTCAACCCG CGCCCGCCCG CCTCGGCCGA GGCGCGGTTC ACGCAATGCA ACCGCATGAT CGACCTGATC ATCCGCGCGC TTGCGCCGGT GATGCCGGAA CAGGTGATCG CGGGATCGTC GGCCTCGATC AGCTTCGCGG CCTATTCCGG GGTGCGGCCC TCGGGCGACT ACTGGGTGTT CCTGGAGGTG AACGAGGGCG CCTATGGCGG CCGGCCGCGC AGCGACGGGC CGGACAGTAT CGACAACCTG ATGGCCAACA CCCGCAACAA CCCGCTGGAA GACCTGGCCA TGCATATCCC GATGATCTGC GACCGCTACG AGCTGCGCGA CGACGCCCCG CCCGGCGCGG GCGAGTTCCG CGGCGGCATC GGCGTGGTCA AGGCGCAGCG GGTGCTGACC CCCGCCTTCA TCACCCATGA ATCCGAACGC CATACCGAGG CGCCCTGGGG CATCTTCGGC GGCCAGGACG GCGCGGTGGG CCGCTGCACG ATCACCAATC CCAACCGTCC CGGCGAGACG CGCGAGATGC ATTCCAAGTT CTCGGGCCTC GCGGTCGGGC CGGACGACGT GATGACCTAT TACAGCCCCA ACGGCGGCGG CTATGGCGAT CCGCTGAACC GGCCCGCCGC AAAGGTGCTG GAGGACGTGC TGGACGGCTA TTGCTCGGTC GCCCGCGCCC GCGAGGTCTA TGGCGTGGTG GTCGATCCCG AGGCCGAGAC GGTCGATCTG GCCGCCACCG AGAAACTGCG CCTCGCCATG CAGAAACACG ATTGA
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Protein sequence | MNKMTKVSTA VDPITLQVIR GSLETIAEEM GHVLYRMSFS SIIRESQDLG AGLFDVDFNT LCESESTPMH IGSIPGYLRG IAETLEDGEW YEGDVVVHNH PYHGASHTPD LAIVVPVFFR GRLVGFAGNT AHHVDIGAAT PGLIIDVPDV YAEGMLFAGT KLYRKGEPNN AMWNYIRRNS RAAGQLVADI EAQIASARLG ARRFAELLDK YGEETVFAAA NQLMDYAERM IRQRIGEIPD GDYVAEGWLD DDGRNRDRRL KVKVTVRVRG DEVEVDLTGS ADQTPTAYNV PFEGSTKVAA YAGFRKLLLD AATSEVRVPS NEGSFRPIKV TAPLGSIFNP RPPASAEARF TQCNRMIDLI IRALAPVMPE QVIAGSSASI SFAAYSGVRP SGDYWVFLEV NEGAYGGRPR SDGPDSIDNL MANTRNNPLE DLAMHIPMIC DRYELRDDAP PGAGEFRGGI GVVKAQRVLT PAFITHESER HTEAPWGIFG GQDGAVGRCT ITNPNRPGET REMHSKFSGL AVGPDDVMTY YSPNGGGYGD PLNRPAAKVL EDVLDGYCSV ARAREVYGVV VDPEAETVDL AATEKLRLAM QKHD
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