| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4350 |
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| Symbol | mdoD |
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| ID | 4582900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1535955 |
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| End bp | 1537556 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771657 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_918110 |
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| Protein GI | 119387055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0483582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGC AAAAACTCCT TCGTCGCACC CTGCTGCAAA CCGCTCTGGG GGGTGGCGCC
TTCTTCCTGC TGCCGGGCAT CGCGCGGGCG GCCGGGGGCG CCGCCGGCGA TGCGGAGCAG
GCTGCGTTCT CGTTCGAGCT TCTGACGGAA AGGGCGCGCG AACTTGCGCA GCAGGCCTAC
CAACCCCCCG AAATCGAAGA GGCCGAGATC CTGGAACAGG TGGATTACGA CCGCCATAAC
GAAATCCGTT TCCGCAAGGA CCGGGCGCTG TGGGGGGATG GGACGGCGTC CTCGCAGGCG
CGCTTTTTCT TCCCCGGCCG CTATTTCAAG CAGCCCGTGC ATCTTTACGC GCTCGATGGC
GGCATGGCGA CCGAGATCCC GTTCTCGCTG GATCTTTTCG ACATCCCTTC CGACAATCCC
GCCAGGCGGC TGAGCAAGAC CGAGGGTTTT GCCGGCTTCA GCGTCATGGA TGCCGAGACC
GAGCGCGACT GGATGGCCTT TCTGGGCGCG TCCTACTGGC GGACCTCGGG TTACAGCGGG
CAGTTCGGCC TGTCGGCCCG GGGCCTTGCC ATCGATACCG CCATTCCCGA CGGCCCCGAG
GAGTTCCCGC TTTTCACCCA TTTCTGGCTG GAGCCGGAAA CCGAAAGCGG CATGACCACC
TATGCGCTGC TGGACAGCCC GCGCGCGACG GGCGCCTATC GCATCGTCTC GCGCCGTGGC
GAGGGGGTCG TGCAGGAGAT CACCGCCCGG ATCTTCATGC GCGACCCGGT CGAGCGGCTG
GGCATCGCGC CCCTGACCTC GATGTACTGG TTCGGCAAGA ACACGCCGCA TGTCGCGCCC
GACTGGCGGC CCGAGGTGCA CGATTCGGAC GGGCTGGAAA TCCTGACCCA TACCGGCGAA
CGCATCTGGC GGCCGCTGAA CAACCCGCCC CATACGATGG CGAATACCTT TACCGCCCCC
TCGGTCAAGG GGTTCGGGCT GATGCAGCGG GAAAGAAATT TCGAGCAATA CCAGGATGAC
GGCGTCTTCT ACGAAAAGCG CGCCAGCGCC TGGATCGCAC CAAGCGAGGA CTGGGGCGAC
GGCGCGGTCA CGCTGGTCGA GCTGAGCACC GACGACGAGA TCCACGACAA TATCGTGGCC
TTCTGGCAGC CCGCCGCCCC GGCCAGGCGC GGCGACGAAT ACGAGCTGAG CTATACGCTG
TCATGGCTCA AGGACGGCCC GCTGACCGGC ACGACGGGGC AGTTCGCCGC GGTCCGCATC
GGTGCCGGTG GCGTGCCGGG CCAGCCGCGG CCGCAGGAGA CGGTCAAGAT CGTCTGCGAT
TTCACGCCCT GGTCGCTGGG CCCCGACGAC AAGCCGCATC TCAACATCAC CGCCTCGCGC
GGGGTGATCT CCAACGATGC GGTCTATCCC ATCGTGGGCA GCCAGTCCTG GCGCGCGATG
TTCGACCTTG GCTTCGGCGG ACCCGAGGAA CTGGTGGCCC GCGACGACAG TCCCATCGAC
CTGCGCGTAT TCGTTGCGAA GGCCGAGGAT GCGGTGACCG AGACCCTCTT GCTGCAACTC
TTTCCCGCGC AGTTGCGGGC GCTGCTGTCA CGCAGGCCGT GA
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| Protein sequence | MYSQKLLRRT LLQTALGGGA FFLLPGIARA AGGAAGDAEQ AAFSFELLTE RARELAQQAY
QPPEIEEAEI LEQVDYDRHN EIRFRKDRAL WGDGTASSQA RFFFPGRYFK QPVHLYALDG
GMATEIPFSL DLFDIPSDNP ARRLSKTEGF AGFSVMDAET ERDWMAFLGA SYWRTSGYSG
QFGLSARGLA IDTAIPDGPE EFPLFTHFWL EPETESGMTT YALLDSPRAT GAYRIVSRRG
EGVVQEITAR IFMRDPVERL GIAPLTSMYW FGKNTPHVAP DWRPEVHDSD GLEILTHTGE
RIWRPLNNPP HTMANTFTAP SVKGFGLMQR ERNFEQYQDD GVFYEKRASA WIAPSEDWGD
GAVTLVELST DDEIHDNIVA FWQPAAPARR GDEYELSYTL SWLKDGPLTG TTGQFAAVRI
GAGGVPGQPR PQETVKIVCD FTPWSLGPDD KPHLNITASR GVISNDAVYP IVGSQSWRAM
FDLGFGGPEE LVARDDSPID LRVFVAKAED AVTETLLLQL FPAQLRALLS RRP
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