Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4348 |
Symbol | |
ID | 4582898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1533474 |
End bp | 1535159 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639771655 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_918108 |
Protein GI | 119387053 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.619101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGATGC TGACGGCTGC ACGCCTGCGC CGCGCCATAT CCGGCACCCG CCGGCCCGAC AGCAGCTACG ACGCCGAGGC CGGGCAATCG CTGGTCCGGG TGGTGCTGAC CGTCGTGGTC GCGGCCTATG CCATGATCGG CAACCTGCTG GAACTGGTGG ACGAAAGCGC CGACCTGGTC TTTCAGATCT ACATGCCGGT CTTCATGACC GTCACCTGCC TGATGTTCGC CGCGATCCGC CTGTGGCCCG GCGTCTATCA CTGGCGCCGG ATCTTCTGCA TGGTGCTGGA CTTCGGTACG CTGACGCTGC TGATGACGCT GGGCGGGCCG TTCATGGCGC CGATGGCCTC GCTGCTGCTT TGGGTGACGG TGGGCTTCGG CATGCGCTAC GGCACGCGCT ATCTGGTCGG CGCGACCGTC GCGGCGCTGG TCAGCCTGAT GCTGATCGCC GTCTTCAGCC CGTTCTGGCG CGCCCAGCCC TATCTGGTGG CGACCTTCGT GCTGACCTCG CTGATCGTGC CCTTCTATGC CAACCTGCTG CTGGCCGACA CGCGCGAGGC CTATCGCTCG GCCGATGCCG CCAACCTGGC CAAGTCGCGC TTTCTGGCCC AGGCCAGCCA CGACCTGCGC CAGCCGATCC ACGCCATCAG CCTGTTCACC AATTGCCTGC GCGAGGCGGG GCTGGCGCCG TCCGAACGGC AGATGGTCGA GAATATCGAG CATTCGCTGC AAAGCGTCCG GCGCATGTTC CGCTCGCTTC TGGACATCGC GACGCTGGAC AGCGGCGGCG TCGTGCCGCG CATGCAGCCG GTGCCGCTGG GCGCGATCCT GCGCGACGTC GTCACCCAGC ACCAGGAGGC CGCACGCCGT GCCGGGGTCG AGCTGCGGCT GGTCGAAACC GGGCTGACGG TGGAAAGCGA TCCGGGCCTG CTGACGGTGA TGCTGCAAAA CCTGGTCTCG AACGCGGTGA AATACGCGCC CGGCGCGCGG GTGCTGATCG GCTGCCGCAG GCACGGGTCA GGGGTCGACG TGCTGGTGAT CGACCGCGGC ATCGGCGTCG CGCCCGAGCA CCAGCCGCAT CTGTTCGAGG AGTTCTATCG CGTCCAGCCG CCCGGCCGCG ATGTCGAGGG CGTGGGGCTG GGCCTTGCCA TCGTGCAACG CATGGCGCAG CTGATCGGCG CGGGGGTCGA GCTGCGCTCG ATCCCCGGAC GCGGGACCAC GGTGGCGCTG ACCGGGCTGC GCGCGACCGA ACCGCCGCCC GCGCCGCCCC ACCCCGACGG CCACCCCGAC GACCGCCCGC GCAGCAGCCC GCCGCAAAGC CTGCTGCAGG GGCTTCGCGT CCTGCTGATC GAGGACGATC CGGCCGTGCT TCTGTCCACG CAGATGCTGA TGGAACGCTG GGGCTGCACG GTCCACGCCC ATGAGCAGCC GCCCCGCGAT GTGCCGCCCT GCGACATGAT CGTCGCCGAT TTCGACCTGA ACGGCCCGCT GACCGGCGGC GATGCCATCG CCATCGCGCG CGCCGCCCTT GGCGCGCCGA TCCCCGCCAT CGTCATCACC GCCCATGACG AGGCCCGCGT GCGCGAACGG TTGGGCGAGG CCGGCCTGCC GATCCTGCCC AAGCCGATGC GGCCGGCCGA GTTGCGCGCG CTGATGCTGT CGCTGCGGCT GGAGCGCGGC GGCTAA
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Protein sequence | MGMLTAARLR RAISGTRRPD SSYDAEAGQS LVRVVLTVVV AAYAMIGNLL ELVDESADLV FQIYMPVFMT VTCLMFAAIR LWPGVYHWRR IFCMVLDFGT LTLLMTLGGP FMAPMASLLL WVTVGFGMRY GTRYLVGATV AALVSLMLIA VFSPFWRAQP YLVATFVLTS LIVPFYANLL LADTREAYRS ADAANLAKSR FLAQASHDLR QPIHAISLFT NCLREAGLAP SERQMVENIE HSLQSVRRMF RSLLDIATLD SGGVVPRMQP VPLGAILRDV VTQHQEAARR AGVELRLVET GLTVESDPGL LTVMLQNLVS NAVKYAPGAR VLIGCRRHGS GVDVLVIDRG IGVAPEHQPH LFEEFYRVQP PGRDVEGVGL GLAIVQRMAQ LIGAGVELRS IPGRGTTVAL TGLRATEPPP APPHPDGHPD DRPRSSPPQS LLQGLRVLLI EDDPAVLLST QMLMERWGCT VHAHEQPPRD VPPCDMIVAD FDLNGPLTGG DAIAIARAAL GAPIPAIVIT AHDEARVRER LGEAGLPILP KPMRPAELRA LMLSLRLERG G
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