Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4311 |
Symbol | |
ID | 4582861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1490452 |
End bp | 1491363 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771618 |
Product | LysR family transcriptional regulator |
Protein accession | YP_918071 |
Protein GI | 119387016 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGGA TCGACGGCAT CCGCGCCTTT GTCGCCGTGG TCGATGCAGG ATCGTTCACC CGCGCGGGCG AGCGGCTGGG GATCTCGAAC AAGCTGGTCA GCAAATATGT CGCGGCGCTG GAGGGGCAGC AGGGCGTCAC GCTGCTTAAC CGCACCACCC GCGCGCTGTC GCTGACCCCG GCGGGCGAGC GCTACCTGAC CGCCGCCCGC CGCGTGCTGG CGGCGGTCGA GGAACTGGAT GCGCAGGCCC ATGCCGAGGA GGGTGCGCTG ACGGGCCGGC TGCGCATCAC CGCACCCGTC GCCTTTGGCG AGATGTTCGC GACCACCCTG ACCCGCGATT TTGCCCGTGT GCATCCGGGC ATCGATATCG ACCTGAACCT GTCGGATCGC TATGTCGACC TGGCGGCCGA GGGCTTCGAC CTGGCGCTGC GCATCGGCCA GCTTCCCGAT TCCAGCCTGA TCGCCCGCCG CATCGGCCAG ACCGAGACCT GGGTGGTGGC CAGCCCCGCC TATCTGGCCG CGCATCCACG CCCGAACCGG CCCGAGGATC TGCGCGACCA TGTGAACATC CGCGACAGCA ATGCCCAGAA TCCGGGCCGG GCCGTCTTTC TGATCGAGGG CAAGGCGGTC AGCGTCCCCT TGCCCGGCCG CATCACGGTC AACAGCGCCC AAGCCGTGCG GCGGTTGGTG CTGGAGGGCG AGGGCGTCGC GCTGATCCCC AGCTTCGTCG TCGCCCGCGA CGTGGCCGAG GGCCGGCTGG AACGACTGCT GCCCGGTTTC GTCCGCCCGC AACTGGACAT CCAGGCACTG TATCTGCCGC GACCCTTCCT GCCGCCACGG CTGACGGCCT ATCTGGACCA CCTGCGGATG GGGCTCAGCC CGCTGCTGAA AGCACCGCGC CCGGATTCAT GA
|
Protein sequence | MDRIDGIRAF VAVVDAGSFT RAGERLGISN KLVSKYVAAL EGQQGVTLLN RTTRALSLTP AGERYLTAAR RVLAAVEELD AQAHAEEGAL TGRLRITAPV AFGEMFATTL TRDFARVHPG IDIDLNLSDR YVDLAAEGFD LALRIGQLPD SSLIARRIGQ TETWVVASPA YLAAHPRPNR PEDLRDHVNI RDSNAQNPGR AVFLIEGKAV SVPLPGRITV NSAQAVRRLV LEGEGVALIP SFVVARDVAE GRLERLLPGF VRPQLDIQAL YLPRPFLPPR LTAYLDHLRM GLSPLLKAPR PDS
|
| |