| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4295 |
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| Symbol | |
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| ID | 4582845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1472593 |
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| End bp | 1474992 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771602 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_918055 |
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| Protein GI | 119387000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT TCGACGACTC GGACGCCTTC GAGGCCGCAG CCGCCCCGGT TCCGCTTTCC
CAGCGTGCCA TGGGCGCACG GCCGACGCCC TATCTGGATG GGTTGAACCC GGCGCAACGC
GCGGCCGTCG AGGCGCTGGA CGGGCCGGTC CTGCTGCTTG CGGGTGCCGG CACCGGCAAG
ACCCGCGCCC TGACCACGCG CATCGCGCAC CTGCTGAACC TGGGCCTCGC CCGGCCCGGG
CAGATCCTGG CCGTGACCTT TACCAACAAG GCCGCGCGCG AGATGAAGGA CCGCATCGGC
CGGCTCTTGG GCGAGATGGT CGAGGGCATG CCCTGGCTTG GCACCTTCCA CTCGATCAGC
GTCAAGATCC TGCGCCGCCA TGCCGAACTC ATCGGCGATG GCGAGCTGCA CCTGAAGCCC
AGCTTCACCA TCCTGGACAC CGACGACCAG ATCCGGCTGC TCAAGCAGCT GATCCAGGCC
GAGAATATCG ACGAGAAGCG CTGGCCGGCG CGGCAACTCG CGCATCTGAT CGACGGCTGG
AAGAACCGCT GCTTGTCCCC GGCCAAGCTG CCCAAGGGCG AGGAACGCGC TTTCGACGGT
TGGGGCGGGC GGCTTTACGC CGCCTATCAG CGCCGGCTGC TGGAACTGAA CGCGGTCGAT
TTCGGCGACC TGCTGATGCA TTGCGTCAAC CTGTTCCAGG CGCATCCCGA CGTGCTGCGG
ACTTGGCAGG ACCGTTTCCG CTATATCCTG GTGGACGAGT ATCAGGACAC CAACGTCGCG
CAATACATGT GGCTGCGGCT GTTGGCGCAG GCGCATCGCA ACATCTGCTG CGTGGGCGAC
GACGACCAGT CGATCTATGG CTGGCGCGGC GCCGAGGTCG GCAACATCCT GCGGTTTGAA
AGCGATTTCC CCGGCGCGCA GGTGATCCGG TTGGAGCAGA ACTATCGCTC GACCCCGCAT
ATCCTTGCCG CCGCCTCGGG GCTGATCGCG GCGAACAAGG GGCGGCTGGG CAAGACGCTG
TGGACCGAGG CCGAAGAAGG GGAGCGCGTG CGCCTGATCG GCCATTGGGA CAGCGAGGCC
GAGGCGCGCT GGATCGGCGA GGAGATCGAG GCGTTCCAAG GCGGTCATCG CCACTCCATC
GGCCGGCGCA GCCTGAACGA CATTGCCATC CTCGTGCGCG CCAGCCACCA GATGCGGGCC
TTCGAGGACC GCTTCATGAC CATCGGCCTG CCTTACCGGG TGATCGGCGG CCCGCGCTTC
TACGAGCGGC AGGAAATCCG CGACGCCATG GCCTATTTCC GGCTGGCGGT CAGCCCCACC
GACGACCTGG CCTTCGAGCG TATCGTGAAC GTGCCCAAGC GCGGCCTGGG CGACAAGGCG
GTGCAGAAGA TCCAGGTCGA GGCGCGGGAA CGCGGGCTGT CGCTTCTGGA GGGCGCGGCC
TCGGCCGTGG CCAGCGGCGC GCTTGGCGGC AAGGGGGCGG GGGCGCTGCG GCAGTTCACC
GAGGCCATGG GCCGCTGGCA TGCCGATGCG CTGGACAGTC GCATGAACCA TGTCGAGCTG
GCCGAGCGGA TCCTGGACGA ATCCGGCTAT ACCGCCATGT GGCAGAACGA CAAGTCGCCC
GACGCGCCGG GGCGGCTCGA CAACTTGAAA GAATTGATAA AGGCGCTGGA AGAATTTGAA
AACCTTCAAG GTTTCCTCGA GCATGTCGCG CTGGTCATGG ACAATGACAG GGGCGAGCAG
TCCGAGGAGG TCTCGATCAT GACGCTGCAT GCCGCCAAGG GGCTGGAATA TCCCATCGTC
TTCCTGCCGG GCTGGGAGGA TGGGCTGTTC CCCAGCCAGC GCAGCATGGA CGAAAGCGGC
ATGAAAGGGT TGGAAGAAGA GCGGCGCCTG GCCTATGTCG GCATCACGCG CGGCGAGGAA
CTGGTGACGA TCAGCTTTGC CGGCAACCGC CGCATGTATG GGCAATGGCA ATCGTCGCTG
CCTTCGCGCT TCATCGACGA ACTGCCCGAG GATCATGTCG AGGTGTTGAC CCCGCCGGGC
CTTTACGGCG GCGGCTATGG CGCGGCGGTC CAGCCCTTTG CGCAATCGGT CATGCATGAA
CGCGCGGCGC GGGCGGATGT CTATAACTCG CCGGGCTGGA AGCGGATGCA GGAACGGTCC
GCCCAGCGTG CGCAGCCCGT CCACCGCACG CCGGTCGTCA TCGATGCCGA GCCGGCGGCG
CGATTTTCGG TCGGCGACCG GGTGTTCCAC CAGAAATTCG GCAACGGCAC CGTCATGGGC
ATCGCCGAGG ATACGCTGAC CGTCGAATTC CCGACCGGCT TCAAGACCAT CAAGGCGGGC
TATGTGCAGC CCGCCTCGCA GGCCGGTGGG GCCGGCTCGC TGGACGACGT GCCGTTCTAG
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| Protein sequence | MSNFDDSDAF EAAAAPVPLS QRAMGARPTP YLDGLNPAQR AAVEALDGPV LLLAGAGTGK
TRALTTRIAH LLNLGLARPG QILAVTFTNK AAREMKDRIG RLLGEMVEGM PWLGTFHSIS
VKILRRHAEL IGDGELHLKP SFTILDTDDQ IRLLKQLIQA ENIDEKRWPA RQLAHLIDGW
KNRCLSPAKL PKGEERAFDG WGGRLYAAYQ RRLLELNAVD FGDLLMHCVN LFQAHPDVLR
TWQDRFRYIL VDEYQDTNVA QYMWLRLLAQ AHRNICCVGD DDQSIYGWRG AEVGNILRFE
SDFPGAQVIR LEQNYRSTPH ILAAASGLIA ANKGRLGKTL WTEAEEGERV RLIGHWDSEA
EARWIGEEIE AFQGGHRHSI GRRSLNDIAI LVRASHQMRA FEDRFMTIGL PYRVIGGPRF
YERQEIRDAM AYFRLAVSPT DDLAFERIVN VPKRGLGDKA VQKIQVEARE RGLSLLEGAA
SAVASGALGG KGAGALRQFT EAMGRWHADA LDSRMNHVEL AERILDESGY TAMWQNDKSP
DAPGRLDNLK ELIKALEEFE NLQGFLEHVA LVMDNDRGEQ SEEVSIMTLH AAKGLEYPIV
FLPGWEDGLF PSQRSMDESG MKGLEEERRL AYVGITRGEE LVTISFAGNR RMYGQWQSSL
PSRFIDELPE DHVEVLTPPG LYGGGYGAAV QPFAQSVMHE RAARADVYNS PGWKRMQERS
AQRAQPVHRT PVVIDAEPAA RFSVGDRVFH QKFGNGTVMG IAEDTLTVEF PTGFKTIKAG
YVQPASQAGG AGSLDDVPF
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