Gene Pden_4269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4269 
Symbol 
ID4582819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1440378 
End bp1441145 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID639771576 
ProductABC transporter related 
Protein accessionYP_918029 
Protein GI119386974 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCGCATTGCA GACCCGCGGC CTTGGGGTAA AATACGGCAA CTTCCACGCG 
CTGGCCGAGG TGGACCTGCA GATCCGCCGC AACTCGGTCC ATTCGATCAT CGGGCCGAAC
GGGGCGTGCA AGACCACGCT GTTCCACGCG CTGACCGGGC GGGTGCGGGC ATCCTCGGGC
CGGATCGAGC TGGACGGGCG CGACATCACC GACACCTCGG ACGACGACCG GGTGCGGCTG
GGCATCGCGC GCTCGTTCCA GGTGACCAGC CTGTTCCCGA ACCTGGCCCT GCGCGAGAAC
CTGCGCCTTG CCGCCCAGGG CCGCACGCCG TGGCAGGCGC TCGCGCCCTG GCGGCGGGCC
GAGGCCAATG CCGAGGCGCT GGCCATCGCC GACGAGGTGA TCGAGCGGCT GGCGCTTGCC
CCCGTGTCGA ACCGGCTGGC GGGCGAGCTG TCGCATGGCC AGCAGCGGCG GCTGGAGGTC
GGCATGGCCA TGGCCGCGCG GCCGCGCGTC ATCCTGCTGG ACGAGCCGAC ATCCGGCATG
GGCATCGACG ACATCGAGGC GATGAAGCAG CTGATCCGCG ACCTGGGCCG CGACCATACC
GTGCTGTTCA TCGAGCATAA CATGGGCATC GTCATGAACA TCTCGGACAT GGTCACGGTG
ATGCGGCTGG GCCGCAAGCT GGTCGAGGGG CCACCGGCGC AGGTCCGCGA CGACCCCGAG
GTGCAGCGCG CCTATCTGGG CAACATGATC ACGGGGGACA TCGCATGA
 
Protein sequence
MTDIALQTRG LGVKYGNFHA LAEVDLQIRR NSVHSIIGPN GACKTTLFHA LTGRVRASSG 
RIELDGRDIT DTSDDDRVRL GIARSFQVTS LFPNLALREN LRLAAQGRTP WQALAPWRRA
EANAEALAIA DEVIERLALA PVSNRLAGEL SHGQQRRLEV GMAMAARPRV ILLDEPTSGM
GIDDIEAMKQ LIRDLGRDHT VLFIEHNMGI VMNISDMVTV MRLGRKLVEG PPAQVRDDPE
VQRAYLGNMI TGDIA