Gene Pden_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4263 
Symbol 
ID4582813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1431909 
End bp1434080 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content65% 
IMG OID639771570 
Producthydantoinase/oxoprolinase 
Protein accessionYP_918023 
Protein GI119386968 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.730254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGAG GAAAAACCAT GCCATTGGAC AAGGAATCGC ATCGAAAGGT GCAGGTGCTG 
GGCATCGACG CCGGCGGCAC CATGACCGAC ACGTTCTTCG TCGACAGCGA CGGGGACTTC
GTGGTCGGCA AGGCCCAGTC GACACCGCAG AACGAGGCGC TCGGCCTGAT CGCCAGCTCG
AAGGAGGGGC TGGAGCATTG GGGGCTGACG CTGGACGAGG CGCTGTCGGA AATCCAGACC
GGAGTCTATT CCGGCACCGC GATGCTGAAT CGCGTGGTGC AGCGCAAGGG GCTGCGCTGC
GGGCTGATCG TCAATGCGGG GATGGAGGAC TTCCACCGCA TGGGCCGCGC GATCCAGGCC
TATCTGGGCT TTGCCTATGA GGACCGGATC CACCTGAACA CGCATTATTA TGACGAGCCG
CTGGTGCCGC GTCACCTGAC CCGCGGCGTG ATGGAGCGGG TGGACATGTC CGGCACCGTG
GTCATCCCGC TGCGCGAGGA AACCGCCCGC CAGGCGGCGC GCGAACTGAT CGCCCAGGAT
GTCGAGGGCA TCGTGATCTC GCTTCTGCAC AGCTATCGCA ACCCCGCCCA TGAGCGCCGG
GTGCGCGACA TCGTGCTGGA GGAGGTCGAG AAATCGGGCA AGGCGATCCC GGTCTTTGCC
TCGACCGACT ATTACCCGGT GCGCAAGGAG ACCCATCGCA CCAACACCAC GATCCTGGAG
GCCTATGCCG CCGAGCCTTC GCGGCAGACG CTGAACAAGA TCTCTTCGGC CTTCAAGGAG
AACGGCTCGA AATTCGACTT CCGGGTGATG GCGACCCATG GCGGCACCAT CAGCTGGAAG
GCCAAGGAAC TGGCGCGCAC CATCGTCTCG GGGCCCATCG GCGGGGTGAT CGGCGCCAAA
TACCTGGGCG AGGTGCTGGG CTATTCCAAC ATCGCCTGTT CGGATATCGG CGGTACCTCG
TTCGACGTGG CGCTGATCAC CCAGAACGAG CTGACGATCC GCAACGACCC GGACATGGCG
CGGCTGGTGC TGTCGCTGCC GCTGGTCGCG ATGGATTCGG TCGGCGCGGG GGCGGGCAGC
TTCATCCGGC TGGACCCCTA TACCAAGGCG ATCAAGCTGG GGCCGGATTC GGCGGGCTAC
CGGGTCGGCG TCTGCTGGGC CGAATCGGGG ATCGAGACCG TCACCATCTC GGACTGCCAC
GTCATCCTGG GCTATCTGAA CCCCGACAAC TTCCTGGGCG GCCAGGTCAA GCTGGACCGC
GAGCGCGCCT GGAACGCGAT GAAGGAACAG ATCGCCGATC CGCTGGGCCT GTCGGTCGAG
GATGCGGCGG CGGGCGTCAT CGAATTGCTG GACAGCGACC TGCGCGACTA TCTGCGCTCG
ATGATCTCGG GCAAGGGTTC GACGCCGGGC AACTTCGTCT GCTTCAGCTA TGGCGGCGCG
GGTCCGGTCC ATACCTACGG CTATACCGAG GGGCTGGGCT TCGAGGACGT GATCGTGCCG
GCCTGGGCTG CGGGCTTCTC GGCCTTCGGC TGCGCGGCGG CGGATTTCGA ATACCGCTAT
GACAAGTCGC TGGACATCAA CATCGCCCCC GATGCCCCCG ATGCGCTGAA GACCACGCAG
GCCGAGACGC TGCAGGCCGC CTGGGAAGAG CTGAAGGAAC GCGTCCTCGA AGAGTTCGAG
ATCAACGGCT ACAGCCCCGA CAAGGTGCAA CTGCAACCGG GCTTCCGCAT GCAATATCGC
GGCCAGCTGA ACGACCTGGA GATCGAAAGC CCGATCATGG AGGCGCGTTC GGCCGAGGAC
TGGGACCGGC TGGTCGAGGC GTTCAACGAC ACCTATGGCC GCGTCTACGC CGCCTCGGCG
CGCTCGCCCG AACTTGGCTA TTCGGTCACG GGCGCGATCA TGCGCGGTAC GGTGCCGATC
CCCAAGCCGC GGATCCCGAA AGAGGAATTG CAGGGCGAAG CGCCGCCCGA AGAATCGAAG
CTGGGCACCC GCAAGTTCTA TCGCCACAAG AAATGGGTGA ACGCGCAGCT TTACCAGATG
GAGAAACTGC GCCCCGGCAA CCGCATCACC GGCCCCGCGA TCATCGAATC CGACGCCACG
ACCTTTGTCG TGCCGGGCGG CTTCGAGACC TGGCTCGACG GGCACCGGCT TTTCCACCTC
AAGGAAATCT GA
 
Protein sequence
MGGGKTMPLD KESHRKVQVL GIDAGGTMTD TFFVDSDGDF VVGKAQSTPQ NEALGLIASS 
KEGLEHWGLT LDEALSEIQT GVYSGTAMLN RVVQRKGLRC GLIVNAGMED FHRMGRAIQA
YLGFAYEDRI HLNTHYYDEP LVPRHLTRGV MERVDMSGTV VIPLREETAR QAARELIAQD
VEGIVISLLH SYRNPAHERR VRDIVLEEVE KSGKAIPVFA STDYYPVRKE THRTNTTILE
AYAAEPSRQT LNKISSAFKE NGSKFDFRVM ATHGGTISWK AKELARTIVS GPIGGVIGAK
YLGEVLGYSN IACSDIGGTS FDVALITQNE LTIRNDPDMA RLVLSLPLVA MDSVGAGAGS
FIRLDPYTKA IKLGPDSAGY RVGVCWAESG IETVTISDCH VILGYLNPDN FLGGQVKLDR
ERAWNAMKEQ IADPLGLSVE DAAAGVIELL DSDLRDYLRS MISGKGSTPG NFVCFSYGGA
GPVHTYGYTE GLGFEDVIVP AWAAGFSAFG CAAADFEYRY DKSLDINIAP DAPDALKTTQ
AETLQAAWEE LKERVLEEFE INGYSPDKVQ LQPGFRMQYR GQLNDLEIES PIMEARSAED
WDRLVEAFND TYGRVYAASA RSPELGYSVT GAIMRGTVPI PKPRIPKEEL QGEAPPEESK
LGTRKFYRHK KWVNAQLYQM EKLRPGNRIT GPAIIESDAT TFVVPGGFET WLDGHRLFHL
KEI