Gene Pden_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4251 
Symbol 
ID4582801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1417634 
End bp1418107 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID639771558 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_918011 
Protein GI119386956 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.3601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC AGGCGAAGCA CTATCTGGAG CAGGCGGTGA TGCTGGCGCA TCGCAACGTG 
CAGGCTGGCG GCCGGCCCTT TGGCGCGGTG GTGGTGCGGG ACGGCGAGGT GCTGGCCACC
GGCGTCAACG AAACCGTCGC CACCCATGAC CCGACCGCCC ATGCCGAACT GGTGGCGCTG
CGTGCCGCCG CGCTGCGGCT GGGCTCGCCC GATCTTTCGG CCTGCGTGGT CCATGCCAGC
GGCCAGCCCT GCCCCATGTG CCTGGCGGCC ATGCGGCTGG CCGGCGTGAC CAAGGTGCAT
TACGCCTATT CGAACCAGGA CGGCGCACCC TACGGCCTGT CCACGGCCGC GCTTTACGAA
GAACTGGCCA GGCCCCTCGA CCAGCAATCC ATCGCCATCC GCCACCTGCC CGTGCGGCCC
GAGGGCGCCG GCGATCTTTA TGCCGACTGG AAAGCACGGC AGGAGCGGGC GTGA
 
Protein sequence
MSDQAKHYLE QAVMLAHRNV QAGGRPFGAV VVRDGEVLAT GVNETVATHD PTAHAELVAL 
RAAALRLGSP DLSACVVHAS GQPCPMCLAA MRLAGVTKVH YAYSNQDGAP YGLSTAALYE
ELARPLDQQS IAIRHLPVRP EGAGDLYADW KARQERA