Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4237 |
Symbol | |
ID | 4582787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1401051 |
End bp | 1403768 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771544 |
Product | nitrite transporter |
Protein accession | YP_917997 |
Protein GI | 119386942 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.880598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.425469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGACC CAAGTTCCTT TCCCCCGATG CAGCAGCAAA AGGCGCTGTG GCTCAGCACC ACCGCCTTCA CGCTGTGCTT CGCCGTCTGG ACGATCTTTT CCATCATCGG CATCACCATC AAGGAAGAGC TCGGCCTGAC CGAGTTCGAA TACGGTGTGC TGATCGCCAC GCCCATCCTG ACCGGCTCGC TGGTGCGGCT GATCCTGGGT GTCTGGACCG AACGCTATGG CGGGCGGCTG GTGTTTTCGC TGCAGATGCT GTTCACCGGC ATCGCCACCT GGGCGCTGAC CTGGGCCGAG AGCTATGCCG GCTTCCTGCT GGCCGCGCTG GGCGTGGGCA TGGCGGGCGG CTCGTTCATC ATCGGCGTCG CCTATGTCTC GAAATGGTTC CCGGCCCAGC GGCAGGGCAC CGCGCTCGGC ATCTTCGGCA TGGGCAACGT GGGCGCGGCG GTGACCAAGT TCATCGCGCC CTTCATCCTG GTCGCCTGGG GCTGGCAGGC CGTGGCGCAG ATCTGGGCGG TGGGCATCGC GCTGATGGGC GTGGTCTTCC TGCTGGTCGC CCGCGACGAT CCCGATTTCG AGGCCCGCCG CGCCCAGGGC ATCGCCGCGC CGACGCTGGC CGAGCAATTC GCGCCGCTGA AGAGGCTGCA GGTCTGGCGC TTCGCGCTTT ACTATTTCTT CGTATTCGGC GGTTTCGTCG CCCTGGCGCT GTGGCTGCCG CATTACCTGA CGCAGGTCTA TGGCGTCGAC CTGCGGGTCG CGGGCATGGC GGCGGCGGCC TTCAGCCTGT CGGCCAGCAT CTTCCGCGCC TATGGCGGCG TGCTGTCGGA CCGTTTCGGC GCGCGCACGG TGATGTATTG GACCTTCGGC TTCAGCGCCC TGTTCCTGTT CATGCTGTCC TATCCGCCGA CCGACTATAC CATCCGCGGC AAGGACGGGC TGATCTCGTT CTCGACCGAG ATGGGGCTCT GGCCCTTCGT GGTCACGCTG TTCGCGCTGG GCTTCTTCAT GAGCCTGGGC AAGGCTGCGA TCTTCAAGCA TATCCCGGTC TATTACCCGA ACCATGTCGG GGCGGTCGGC GGGCTTGTCG GCATGATCGG CGGCCTGGGC GGCTTCATCC TGCCCATCGT CTTTGGCGCG CTTCTGGACC TGACCGGGAT CTGGACCTCC AGCTTTGCGC TGCTGTTCCT GGTGGTCGTC GTCTCGATGG CCTGGATGCA TCTGTCGATC CGCGCCATGG AGCGCCGCGC GCAGGGCCGG GCCCTGGACC GGCTGCCGAA CTTTCCCGAA CTGGCCGAGG TGCATGACCC CGAGCGCACG GTGATGCCGC GCGTGCTGGA CGACTGGCGC CCCGAGAACC CGACCTTCTG GGCCGAGCAG GGCCGCAAGA TCGCCAGGCG CAACCTGTGG ATCTCGATCC CCGCCCTGAC GCTGGCCTTC GCGGTCTGGA TGGTCTGGTC GGTGGTGGTG GCCAAGCTGC CGCTGATCGG CTTCGACTTC ACCCAGGACC AGCTGTTCTG GCTGGCGGCG CTGCCGGCGC TGTCCGGCGC CACGCTGCGC ATCTTCTACA GCTTCATGGT GCCGATCTTT GGCGGGCGGC TGTGGACCAC GCTGTCCACC GCCTCGCTGC TGATCCCGGC CATGGGCATC GGCTATGCGG TGCAGGATCC CTCGACGCCC TATCTGATCT TCGTGGTGCT GGCGCTGCTT TGCGGGCTGG GCGGCGCGAA CTTCGCCTCG TCCATGGCCA ATATCAGCTT CTTCTTCCCC AAGGCCGAAA AGGGCAACGC GCTGGGGCTG AACGCGGGCC TGGGCAACCT GGGCGTATCG CTGATGCAGT TCCTGGTGCC CATCGTCATC ACCGCCGGCG TTTTCGGCGC CATGGGCGGC GCCCCGCAAG AGCTTTCGGA CGGCGGGCGG CTGTGGATGC AGAACGCGGG CTTCGTCTGG GTGCCCTTCA TCATCGCCTC GACCATCGCG GCATGGCTGG GCATGAACGA CATCACCGAT GCCCGCGCCA GCTTCCGCGA GCAGGCGGTG ATCTTCACCC GCAAGCACAA CTGGGTGATG TGCCTGCTCT ATATCGGCAC CTTCGGCAGC TTCATCGGCT ATTCGGCGGG CTTTCCGCTG CTGACCGGCC TGGCCTTCCC GGACGTGAAC GCGCTGCAAT TCGTCTTTCT CGGCCCGCTG GTCGGTGCGC TCAGCCGCGC AGGAACGGGC TGGCTGTCCG ACCGGGTCGG CGGCGGGCGG GTGACCTTCT GGGTCTTTGC CGGCATGATC GCCTCGGTGG GGCTGGTCAT CGTCTCGCTG CAGGCGCTGT CCTTCTGGGG CTTCTTCGCG GGCTTCATGG CGCTGTTCTT CTTTACCGGG GTCGGCAATT CCTCGACCTT CCAGATGATC CCGGTGATCA TGCGCAAGGA AGTCGCGCGG CTCGAGCCGC AGCTTTCGCC CGAGGATCGT CGCCGCCAGT CCGACCGCGA ATCCGCCGCG ATCATCGCCT TCACCAGCGC GATCGGCGCC TATGGCGGGT TCTTCATCCC CAAGGCTTAC GGCAGCTCGA TCGCCCTGAC CGGATCGGCG CTTGGCGCGC TCTGGGCCTT CCTGGGCTTC TATGTGCTGT GCCTTGCCGT GACCTGGGTG TTCTACACCC GTCCGGGCGG CCTTCTGCAC GACATCGAAC GCGGCCGCGC CCCTTCCGGC GCCGCCACCC CCGCCTGA
|
Protein sequence | MPDPSSFPPM QQQKALWLST TAFTLCFAVW TIFSIIGITI KEELGLTEFE YGVLIATPIL TGSLVRLILG VWTERYGGRL VFSLQMLFTG IATWALTWAE SYAGFLLAAL GVGMAGGSFI IGVAYVSKWF PAQRQGTALG IFGMGNVGAA VTKFIAPFIL VAWGWQAVAQ IWAVGIALMG VVFLLVARDD PDFEARRAQG IAAPTLAEQF APLKRLQVWR FALYYFFVFG GFVALALWLP HYLTQVYGVD LRVAGMAAAA FSLSASIFRA YGGVLSDRFG ARTVMYWTFG FSALFLFMLS YPPTDYTIRG KDGLISFSTE MGLWPFVVTL FALGFFMSLG KAAIFKHIPV YYPNHVGAVG GLVGMIGGLG GFILPIVFGA LLDLTGIWTS SFALLFLVVV VSMAWMHLSI RAMERRAQGR ALDRLPNFPE LAEVHDPERT VMPRVLDDWR PENPTFWAEQ GRKIARRNLW ISIPALTLAF AVWMVWSVVV AKLPLIGFDF TQDQLFWLAA LPALSGATLR IFYSFMVPIF GGRLWTTLST ASLLIPAMGI GYAVQDPSTP YLIFVVLALL CGLGGANFAS SMANISFFFP KAEKGNALGL NAGLGNLGVS LMQFLVPIVI TAGVFGAMGG APQELSDGGR LWMQNAGFVW VPFIIASTIA AWLGMNDITD ARASFREQAV IFTRKHNWVM CLLYIGTFGS FIGYSAGFPL LTGLAFPDVN ALQFVFLGPL VGALSRAGTG WLSDRVGGGR VTFWVFAGMI ASVGLVIVSL QALSFWGFFA GFMALFFFTG VGNSSTFQMI PVIMRKEVAR LEPQLSPEDR RRQSDRESAA IIAFTSAIGA YGGFFIPKAY GSSIALTGSA LGALWAFLGF YVLCLAVTWV FYTRPGGLLH DIERGRAPSG AATPA
|
| |