Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4204 |
Symbol | |
ID | 4582754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1364245 |
End bp | 1365321 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639771511 |
Product | transport system permease protein |
Protein accession | YP_917964 |
Protein GI | 119386909 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.570844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCCG TGACGCCCGA CCTTCGCCCC GAACGGCTGG AAGGGGACCG CAGCCACCGC GCCCGGCGCC TGGGCCTGTT CCTGGCGCTG CTGCTGGCCG TGGTGGCGGT GATCTCGCTG GGCTGGGGGG CCTCGGGGAC GTCGCTCACG CGGGCGGTCT CGGACCTGAT GGCGGGGCGC GAGCTTGCGG TGCAGGACCG GGTGGTGCTG ATGGACATCC GCCTGCCGCG CGTGCTGATG GGCATCTTCG TCGGTGCCTC GCTGGCGGTC TCGGGCGCGG TGATGCAGGG GCTGTTTCGC AACCCGCTGG CCGATCCGGG CATCGTCGGC GTCAGCTCGG GCGCCTCGCT GGGCGCGATC CTGGCCATCG TGCTGGGCAG CGCGCTGCCC GCCGGGATCG CGGCGTTCTT CGGCTGGTAT CTGGTGCCCG TCGCGGCCTT TGCCGGCGGC TGGCTGACCA CCATCGCGCT TTACCGCATC GCCACGCGGC GCGGGCGCAC CTCGGTCGCG ACCATGCTGC TGGCCGGCAT CGCGCTGGCC GCGATCATGG GGGCGCTTTC GGGCGTGGTG ATCCTGCGCG CCAGTGACCG GGAATTGCGC GACCTGACCT TCTGGGGGCT GGGCTCGCTT GCCGGGGCGA ACTGGCCCAA GCTGCTGGCC GGGGCGCCGA TCATGGCGCT GGCGCTGCTT TACGCCCCCT GGCTGGCGCG CGGTCTGAAC GCGCTGGCGC TGGGAGAGGC GGCAGCCGGC CATGTCGGCA TCCGGGTGCA AAAGGTCAAG AACCGCGCCA TCCTGACCGT CGCCGCCGCC ACCGGCGCCG CCGTTGCGGT CTCGGGCGGC ATCGGCTTCG TCGGCATCGT CGTGCCGCAC CTCTTGCGGC TGGCCAGCGG GCCGGACCAC CGCTGGCTGC TGGTCAACTC GGCGCTTCTG GGCGCGGTGA CGCTGCTGCT GGCCGACATG GTCAGCCGCA CCGTCATCGC CCCGGCCGAA CTGCCGATCG GCATCGTCAC CGCCATCATG GGCGGGCCCT TCTTCCTGTG GATCCTGCTG CGCAACCGGG GGGTGCTGGA CCTGTGA
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Protein sequence | MVAVTPDLRP ERLEGDRSHR ARRLGLFLAL LLAVVAVISL GWGASGTSLT RAVSDLMAGR ELAVQDRVVL MDIRLPRVLM GIFVGASLAV SGAVMQGLFR NPLADPGIVG VSSGASLGAI LAIVLGSALP AGIAAFFGWY LVPVAAFAGG WLTTIALYRI ATRRGRTSVA TMLLAGIALA AIMGALSGVV ILRASDRELR DLTFWGLGSL AGANWPKLLA GAPIMALALL YAPWLARGLN ALALGEAAAG HVGIRVQKVK NRAILTVAAA TGAAVAVSGG IGFVGIVVPH LLRLASGPDH RWLLVNSALL GAVTLLLADM VSRTVIAPAE LPIGIVTAIM GGPFFLWILL RNRGVLDL
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