Gene Pden_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4204 
Symbol 
ID4582754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1364245 
End bp1365321 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content73% 
IMG OID639771511 
Producttransport system permease protein 
Protein accessionYP_917964 
Protein GI119386909 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.570844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCG TGACGCCCGA CCTTCGCCCC GAACGGCTGG AAGGGGACCG CAGCCACCGC 
GCCCGGCGCC TGGGCCTGTT CCTGGCGCTG CTGCTGGCCG TGGTGGCGGT GATCTCGCTG
GGCTGGGGGG CCTCGGGGAC GTCGCTCACG CGGGCGGTCT CGGACCTGAT GGCGGGGCGC
GAGCTTGCGG TGCAGGACCG GGTGGTGCTG ATGGACATCC GCCTGCCGCG CGTGCTGATG
GGCATCTTCG TCGGTGCCTC GCTGGCGGTC TCGGGCGCGG TGATGCAGGG GCTGTTTCGC
AACCCGCTGG CCGATCCGGG CATCGTCGGC GTCAGCTCGG GCGCCTCGCT GGGCGCGATC
CTGGCCATCG TGCTGGGCAG CGCGCTGCCC GCCGGGATCG CGGCGTTCTT CGGCTGGTAT
CTGGTGCCCG TCGCGGCCTT TGCCGGCGGC TGGCTGACCA CCATCGCGCT TTACCGCATC
GCCACGCGGC GCGGGCGCAC CTCGGTCGCG ACCATGCTGC TGGCCGGCAT CGCGCTGGCC
GCGATCATGG GGGCGCTTTC GGGCGTGGTG ATCCTGCGCG CCAGTGACCG GGAATTGCGC
GACCTGACCT TCTGGGGGCT GGGCTCGCTT GCCGGGGCGA ACTGGCCCAA GCTGCTGGCC
GGGGCGCCGA TCATGGCGCT GGCGCTGCTT TACGCCCCCT GGCTGGCGCG CGGTCTGAAC
GCGCTGGCGC TGGGAGAGGC GGCAGCCGGC CATGTCGGCA TCCGGGTGCA AAAGGTCAAG
AACCGCGCCA TCCTGACCGT CGCCGCCGCC ACCGGCGCCG CCGTTGCGGT CTCGGGCGGC
ATCGGCTTCG TCGGCATCGT CGTGCCGCAC CTCTTGCGGC TGGCCAGCGG GCCGGACCAC
CGCTGGCTGC TGGTCAACTC GGCGCTTCTG GGCGCGGTGA CGCTGCTGCT GGCCGACATG
GTCAGCCGCA CCGTCATCGC CCCGGCCGAA CTGCCGATCG GCATCGTCAC CGCCATCATG
GGCGGGCCCT TCTTCCTGTG GATCCTGCTG CGCAACCGGG GGGTGCTGGA CCTGTGA
 
Protein sequence
MVAVTPDLRP ERLEGDRSHR ARRLGLFLAL LLAVVAVISL GWGASGTSLT RAVSDLMAGR 
ELAVQDRVVL MDIRLPRVLM GIFVGASLAV SGAVMQGLFR NPLADPGIVG VSSGASLGAI
LAIVLGSALP AGIAAFFGWY LVPVAAFAGG WLTTIALYRI ATRRGRTSVA TMLLAGIALA
AIMGALSGVV ILRASDRELR DLTFWGLGSL AGANWPKLLA GAPIMALALL YAPWLARGLN
ALALGEAAAG HVGIRVQKVK NRAILTVAAA TGAAVAVSGG IGFVGIVVPH LLRLASGPDH
RWLLVNSALL GAVTLLLADM VSRTVIAPAE LPIGIVTAIM GGPFFLWILL RNRGVLDL