Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4185 |
Symbol | |
ID | 4582735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1340694 |
End bp | 1341395 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771492 |
Product | exsB protein |
Protein accession | YP_917945 |
Protein GI | 119386890 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00303394 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.206688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACGA TAGTTGTCTG CTCGGGCGGA CTCGATTCCG TTTCGCTGGC GCATATGGTC GCCGCGCAAG GCGGGCTGAC GCGCCTGATC TCCTTCGACT ACGGCCAGCG CCACCGCAAG GAGCTGGATT ACGCCGCCCT TGCCGCCCGG CGGCTGGGCG TGCCGCATCA CGTCATCGAC ATGCGCGGTG TGGGGGCGGT GCTGACCGGC TCGGCCCTGA CCGGCGGGGC CGAGGTGCCG GACGGGCATT ATGCCGAGGA GACCATGCGC ATCACCGTGG TCCCGAACCG CAACGCCATC ATGCTGACCG TCGCCTTCGG CATGGCGGCG GCGATGGGCG ATCAGGCGGT GGCGACCGCC GTGCATGGCG GCGACCATTT CATCTATCCC GACTGCCGCC CCGCCTTTAC CCAGGCGTTC CAGCAGATGC AGGACGCCGC GCTGGACGGC TATGCGCAGG CGCGGCTGCT GACGCCCTTC GTGCATCGCA CCAAAGCCGA CATCGTGACC GAGGGCGCCC GCCACGACAC GCCCTTTGCC GAGACCTGGT CCTGCTACAA GGGTGGAGCG CTTCACTGCG GGCGCTGCGG CACCTGCGTC GAGCGGCGCG AGGCGTTCCA CCTGGCCGGC ATCCCCGACC CGACCGCCTA TGAGGACGCG GATTTCTGGC GGCAGGCCAT CGCGGAACGG GAGCGGGCCT GA
|
Protein sequence | MKTIVVCSGG LDSVSLAHMV AAQGGLTRLI SFDYGQRHRK ELDYAALAAR RLGVPHHVID MRGVGAVLTG SALTGGAEVP DGHYAEETMR ITVVPNRNAI MLTVAFGMAA AMGDQAVATA VHGGDHFIYP DCRPAFTQAF QQMQDAALDG YAQARLLTPF VHRTKADIVT EGARHDTPFA ETWSCYKGGA LHCGRCGTCV ERREAFHLAG IPDPTAYEDA DFWRQAIAER ERA
|
| |