| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4181 |
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| Symbol | |
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| ID | 4582731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1337701 |
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| End bp | 1339008 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771488 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_917941 |
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| Protein GI | 119386886 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000770865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.668736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA TGCTGCGCGG CCTGATGGGG GCCTGCGCCA TGACGGCGCT GGCCGCGCCC
GCATGGGCCG AGACGCTGAC CATCGCCACC GTGAACAACG GCGACATGAT CCGCATGCAG
AAGATGACCA AGCCGTTCAC CGACGCGAAC CCGGACATCC AGCTGGAATG GGTCACGCTG
GAAGAGAACG TGCTGCGCCA GCGCGTCACC ACCGACATCG CCACCAAGGG CGGGCAATAT
GACATCGTGA CCGTCGGCAA TTACGAGGTG CCGATCTGGG CCAAGCAAGG CTGGCTCCTG
GCGCTTGAGG ACATGGGCGC GGATTACGAT GCCGCCGACA TCCTGCCGCC CATCGCCGAG
GGGCTGTCGC TGGACGGCAA GCTTTATGCC GCGCCCTTCT ATGGCGAATC CGCGATGATC
ATGTATCGCA CCGACCTGAT GGAAAAGGCC GGGCTGGAGA TGCCCGAGCG CCCGACCTGG
GACTTCATCT ATGACGCGGC GCGCAAGATG ACCGACAAGT CGGCCGAGGT CTATGGTATC
TGCCTGCGCG GCAAGGCCGG CTGGGGCGAG AACATGGCCT TCCTGACCTC GATGGGCGCA
AGCTACGGTG CGCCCTGGTT CGACATGGAA TGGAAGCCGC AATTCACCGG CGAGGCGTGG
AAGAAGGCGC TGACCGACTA CGTCGCGATC ATGAACGAGG CCGGCCCGCC CGGCGCCTCG
TCCAACGGCT TCAACGAGAA CCTGGCGCTG TTCCAGACCG GCAAATGCGG CATGTGGATC
GACGCCACCG TGGCGGCAAG CTTCGTGTCG AACCCCAAGG ATTCGACCGT GGCCGACAAG
GTCGGCTATG CGCTGGCCCC CGAGGGCGAG AAGCCGCAGA TGTGGCTTTG GGCCTGGACG
CTGGCGATCC CGTCCTCGAC CGACGCGCCG GATGCGGCCA AGAAGTTCGT CGCCTGGGCG
ACCTCGAAAG CCTATACCGA GCAGGTCGCG GCGGAAGAGG GCTGGGCGAA CGTGCCGCCG
GGCACCCGGA CCTCGCTCTA CGAGAACCCC GCCTATCAGG AGGCCGCGCC CTTCGCCAAG
CCGACGCTCG ACAGCATCAT GTCGGCCGAC CTGAAGAACC CGACCACCGC CGAGGTGCCC
TATATCGGCA CGCAATGGGT GGGCATCCCC GAGTTCCAAG CGCTTGGCAC CGCGGTCGGC
CAGCAATTCT CGGCCGCCCT GGCCGGGCAG GCCAGCGTCG ACCAGGCGCT GCAGATGGCC
CAGCAGATCG CCGAGCGCGA GATGGCCAAG GCCGGCTATC CGAAGTGA
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| Protein sequence | MSMMLRGLMG ACAMTALAAP AWAETLTIAT VNNGDMIRMQ KMTKPFTDAN PDIQLEWVTL
EENVLRQRVT TDIATKGGQY DIVTVGNYEV PIWAKQGWLL ALEDMGADYD AADILPPIAE
GLSLDGKLYA APFYGESAMI MYRTDLMEKA GLEMPERPTW DFIYDAARKM TDKSAEVYGI
CLRGKAGWGE NMAFLTSMGA SYGAPWFDME WKPQFTGEAW KKALTDYVAI MNEAGPPGAS
SNGFNENLAL FQTGKCGMWI DATVAASFVS NPKDSTVADK VGYALAPEGE KPQMWLWAWT
LAIPSSTDAP DAAKKFVAWA TSKAYTEQVA AEEGWANVPP GTRTSLYENP AYQEAAPFAK
PTLDSIMSAD LKNPTTAEVP YIGTQWVGIP EFQALGTAVG QQFSAALAGQ ASVDQALQMA
QQIAEREMAK AGYPK
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