Gene Pden_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4143 
Symbol 
ID4582693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1299595 
End bp1300044 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID639771450 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_917903 
Protein GI119386848 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0816552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG CCTCGCACAT GCCCACCGCG CTCGATGAGG CCCGTGCCGC CGCCCGGCGC 
GGCGAGGTGC CGGTCGGCGC CGTCCTGGTG GGTGCCGACG GCGCCGTGCT GGCCCGCGCC
GGCAATCGCA CGCGCGAGAT GCGCGACCCC ACCGCCCATG CCGAAATCCT GGCGATCCGT
GCGGCCTGCG CGCATCTCGG CTCGGAACGG CTGCCGGGCG CGCGACTGTG GGTGACGCTG
GAGCCCTGCC CGATGTGTGC CGCTGCCATC TCGGCCGCAC GGATCGAGAT GCTCTATTAC
GGCGCCGAGG ACCCGCGCAT GGGCGGCGTG CGCCATGGCG CGCGGGTCTT CGACCATCCG
CAATGCCATC ACCGGCCAGA GATCATCGAC GGCATTTCGG CAGAAGAATC GCGCCGGCTG
CTGCAAGAAT TCTTTCGTGA ACGCCGCTGA
 
Protein sequence
MDFASHMPTA LDEARAAARR GEVPVGAVLV GADGAVLARA GNRTREMRDP TAHAEILAIR 
AACAHLGSER LPGARLWVTL EPCPMCAAAI SAARIEMLYY GAEDPRMGGV RHGARVFDHP
QCHHRPEIID GISAEESRRL LQEFFRERR