Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4129 |
Symbol | |
ID | 4582679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1284765 |
End bp | 1286222 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639771436 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_917889 |
Protein GI | 119386834 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.413463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGGCA CCGTTCTGAT CGCTGACGAC GACCGCACCA TCCGTACGGT CCTGACCCAG GCCCTGACCC GGGCCGGCTG TCGGGTCCAT GCCACCGGCT CGCTGTCGCA GTTGCTGCGC TGGGTCGAGG AGGGGCGCGG CGATCTGGTC GTCACCGACG TGATGATGCC CGACGGCAAC GGCATCGACA TGATCCCGGC GATCCGCAAG GCGCGGCCCG ACCTGCCGGT GATCGTGATC TCGGCCCAGA ACACCATCGT CACCGCCATT CGCGCCACCG AGGCGGCGGC CTTCGACTAC CTGCCCAAGC CCTTCGACCT GCCCGACCTG ATGGCGCGGG CCGGCCAGGC GCTGTCGCGC CGGGTGCGCA GGTCCGACCC GGCGCCCGCC GCGGCGGCAC CCGCGCCCGA GGCCGGCGCC GACCCGGCCC TGCCGCTGAT CGGTCATGCG CCCTCGATGC AGAACCTGTT TCGCATGGTG GCGCGCGTGC TCAATGCCGA CCTGCCGGTG ATCGTCGCCG GCGAGGCGGG GGTGGGCAAG ACCGTGGTCG CCCGCTCGTT CCACGACCTC TCCGACCGGC GCGAGGCAGG GCTGGTGGTG CTGACCGCGG CCGACCTGTC CGAAGAGGCC ATCCACAACG CCGCCGAGCG GGCGCAGGGC GGCACGCTGC TGATCGAGGA CCCGGCCGGC TTCGACGCCG CCGCCCAGGC AAGGCTGATC GGCATGATCG AGGCATGGGA GGTCGGCCCC GGCCGCAACC TGATGCCGCG CCTTGTTTCG ACCACCGGCC CCGACCCGCA GGCGGACGTG GCCGCGGGCC GGCTGCGGGC GGACCTGTAT TACCGCCTGG CCGGGGTGAC GATCACCGTG CCGCCGCTGC GGGCGCGGGT GGACGACATC CCGCCGCTGG CGCGGCACCT GCTGGCCCGT GCCGCCGCGC AGGGCCTGCC GCAGCGCAAG CTTTCCGAGG GCGCGACGGC GCTGATCCGC GCCTATCCCT TTCCCGGCAA CGTGCGCGAG CTGGAAAACC TGATGCGGCG GCTGGCGCTG ACCGCCGCGG CGGCCGAGAT CAGCGAGGCC GAGGCCCGCA CCGCGCTGGC GCAATCCAGC CCCATCATGC CGCAGGCCCC GGCCGCCGTG CCGACCTCGG CCGCCGGCAC GATCAGCCCG GCCGCCCCGG TCACGCCGCT GGGCGAGCCC GCCAACATGC GGCTGGCGCA ATCGGTCGAG ATGCATCTGC AACGCTATTT CGACCTGCAT GGCGACGACC TGCCGCCCCC GGGCCTTTAC GACCGCATCC TGCGCGAGAT CGAAAAGCCG CTGCTGGAGA TCGCGCTGGA CGCCACCGGC GGAAATCAGC TGCGTTGTGC CGATCTTCTG GGCATAAACC GCAATACGCT GCGCAAGAAA CTGACCGACC TGAATATCGA GGTGACACGG CGCCGCAAAC TGATGTAA
|
Protein sequence | MDGTVLIADD DRTIRTVLTQ ALTRAGCRVH ATGSLSQLLR WVEEGRGDLV VTDVMMPDGN GIDMIPAIRK ARPDLPVIVI SAQNTIVTAI RATEAAAFDY LPKPFDLPDL MARAGQALSR RVRRSDPAPA AAAPAPEAGA DPALPLIGHA PSMQNLFRMV ARVLNADLPV IVAGEAGVGK TVVARSFHDL SDRREAGLVV LTAADLSEEA IHNAAERAQG GTLLIEDPAG FDAAAQARLI GMIEAWEVGP GRNLMPRLVS TTGPDPQADV AAGRLRADLY YRLAGVTITV PPLRARVDDI PPLARHLLAR AAAQGLPQRK LSEGATALIR AYPFPGNVRE LENLMRRLAL TAAAAEISEA EARTALAQSS PIMPQAPAAV PTSAAGTISP AAPVTPLGEP ANMRLAQSVE MHLQRYFDLH GDDLPPPGLY DRILREIEKP LLEIALDATG GNQLRCADLL GINRNTLRKK LTDLNIEVTR RRKLM
|
| |