| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4047 |
|---|
| Symbol | |
|---|
| ID | 4582598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1197245 |
|---|
| End bp | 1198684 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771356 |
|---|
| Product | NAD(P) transhydrogenase, beta subunit |
|---|
| Protein accession | YP_917809 |
|---|
| Protein GI | 119386754 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.754185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACG GATTCACCAC CGCCGCCTAT GTGGTCGCGG CCGTCCTGTT CATCCTGTCC
CTGGGCGGGC TTTCGGGCCA GGAAAGCGCC AAGCGCGCGG TCTGGTACGG CATTGCCGCC
ATGGCGCTGG CCGTCGTGGC AACGCTGATC GGGCCGGGCT ACGGCAATTG GGGGCTGACG
CTCATCATGC TGGCCATCGG CGGCGCCATC GGCTGGGTCG TGGCCAAGCG GGTGCAGATG
ACCGAGATGC CGCAGCTGGT CGCGGCCATG CACAGCCTCG TCGGCCTGGC CGCGGTGCTG
ATCGGCTTCA ACGCCCAGTT CGAGCTGGGC CGGGTGCTGC GCGCCCGCGC CGCCGACGCG
GCGGCCGAGT TCCACGGCTT CGCCGCGGTT CTGGCGCACA AGACCCCGGC CGAGATCGCC
ATGCTCAAGG TCGAGGTGGC GCTGGGGATC TTCATCGGCG CGGTGACCTT CACCGGCTCG
ATCGTGGCCT TCGGCAAGCT GGCCGGCAAG ATCGACGGCA AGCCCAGGAA GCTGCCCGGC
GGGCATATGC TGAACGCCGG TGCGGCGGCG CTGTCGCTCT TGTCGGTGAT CCTCTACTGC
ACCGCCGGGG CGCCGGTGCT GTGGCTGGCG CTGATCACGC TGCTGGCGTT CTTCATCGGC
TATCACCTGA TCATGGGCAT CGGCGGCGCC GACATGCCGG TGGTGGTGTC GATGCTGAAC
AGCTATTCCG GCTGGGCGGC GGCGGCCATC GGCTTCACGC TGGGCAACGA CCTCTTGATC
GTGGTGGGCG CGCTGGTCGG CTCCTCGGGT GCGATCCTGA GCTACATCAT GTGCAAGGCC
ATGAACCGCA ACTTCGTCAG CGTGATCCTG GGCGGCTTCG GCGGCGAGAC CGGCCCGGCG
ATGGAGATCG AGGGCGAGCA GGTGGCCATC GACGCCGACA GCGTGGCGGC GGCACTGAAC
GATGCCGACG AGATCGTGAT CGTGCCGGGC TACGGCATGG CGGTGGCGCA GGCCCAGCAA
TCGGTCAGCG AGCTGACCCG CAAGCTGCGT GCCAAGGGCA AGAACGTGCG CTTTGCCATC
CATCCTGTGG CGGGCCGTCT GCCCGGGCAC ATGAACGTGC TCCTGGCCGA GGCCAAGGTG
CCCTATGACA TCGTGCTGGA GATGGACGAG ATCAACGAGG ACTTCCCGAA TACCGACGTG
GCGATCGTGA TCGGCTCGAA CGACATCGTG AACCCGGCGG CGCAGGAGGA TCCGAACTCG
CCCATCGCCG GCATGCCGGT GCTGGAGGTC TGGAAGGCCA AGCAGGTCTT CGTCAGCAAG
CGCGGCCAGG GCACCGGCTA TTCCGGCATC GAGAACCCGC TGTTCTACAA GGAAAACACC
CGCATGTTCT ATGGCGACGC CAAGAAATCC ATCGACCAAT TGCTCCCCAT GATCGAGTGA
|
|---|
| Protein sequence | MEYGFTTAAY VVAAVLFILS LGGLSGQESA KRAVWYGIAA MALAVVATLI GPGYGNWGLT
LIMLAIGGAI GWVVAKRVQM TEMPQLVAAM HSLVGLAAVL IGFNAQFELG RVLRARAADA
AAEFHGFAAV LAHKTPAEIA MLKVEVALGI FIGAVTFTGS IVAFGKLAGK IDGKPRKLPG
GHMLNAGAAA LSLLSVILYC TAGAPVLWLA LITLLAFFIG YHLIMGIGGA DMPVVVSMLN
SYSGWAAAAI GFTLGNDLLI VVGALVGSSG AILSYIMCKA MNRNFVSVIL GGFGGETGPA
MEIEGEQVAI DADSVAAALN DADEIVIVPG YGMAVAQAQQ SVSELTRKLR AKGKNVRFAI
HPVAGRLPGH MNVLLAEAKV PYDIVLEMDE INEDFPNTDV AIVIGSNDIV NPAAQEDPNS
PIAGMPVLEV WKAKQVFVSK RGQGTGYSGI ENPLFYKENT RMFYGDAKKS IDQLLPMIE
|
|---|
| |