| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4025 |
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| Symbol | |
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| ID | 4582576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1172479 |
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| End bp | 1174299 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771334 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_917787 |
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| Protein GI | 119386732 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.759535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC GCAATATCGC GATCATCGCC CACGTCGACC ATGGCAAGAC CACGCTGGTC
GACCAGCTAT TGAAGCAGTC GGGCAGTTTC CGCGAAAACC AGGCCGTGGC CGAGCGCGTG
ATGGACAGCA ACGACATCGA GCGCGAGCGC GGCATCACCA TCCTGGCCAA GGCGACCTCG
GTCGAGTGGA AGGGCACCCG CATCAACATC GTGGACACCC CCGGCCACGC CGATTTCGGC
GGCGAGGTCG AGCGCATCCT GAGCATGGTG GACGGAGTCT GCCTGCTGGT CGATGCGGCG
GAAGGTCCCA TGCCGCAGAC CAAGTTCGTG ACCTCCAAGG CGCTGGCCCT GGGGCTGCGG
CCCATCGTGG TCCTGAACAA GGTCGACAAG CCCGCCGCCG ACCCGGACAA GGCGCTGGAC
GAGGTGTTCG ACCTGTTCGC GAACCTGGGG GCCAGCGACG AACAGCTTGA TTTCCCGCAT
CTTTACGCCT CGGGCATCGG CGGCTGGGCC GACGAGACGC TGGAGGGACC GCGCAAGGAC
ATGTCGGCGC TTTTCGACCT GGTGCTGCGC CATGTCGAGG CGCCCCGGCA GATCTCGCGC
CAGGACGAAC CCTTCCAGAT GCTGGCGACC ACGCTGGGCG CCGACCCCTT CATCGGCCGC
ATCCTGACCG GCCGGGTCGA GGCCGGCCGC GCCAAGGCCG GCGACACGAT CAAGGCGCTG
TCGCGCGACG GCGAGCGCAT CGAGCAGTTC CGCGTCTCGA AGGTTCTGGC CTTCCGCGGC
CTGACCCAGC AGCCGATCGA CGAAGCGGTG GCGGGTGATA TCGTCACCAT CGCCGGCATG
TCCAAGGCCA CGGTGGCCGA CACGCTCTGC GCGCTCGAGG TCGAGACCGC CCTGCCCGCC
CAGCCCATCG ACCCGCCGAC GATCAGCGTC ACCTTTGGCA TCAACGACAG CCCGCTGGCC
GGCCGCGACG GCAACAAGGT GCAGTCGCGG GTGATTCGCG AGCGGTTGAT GAAAGAGGCC
GAGACCAATG TCGCGATCAA GGTCGAGGAC ACGCCGGGCG GCGACGCCTT CGTCGTCTCG
GGCCGCGGCG AATTGCAGAT GGGCGTGCTG ATCGAGAACA TGCGTCGCGA GGGATTCGAG
CTGTCGATCT CGCGCCCGCG GGTAATCTTC CGCGATATCG ACGGCGTGCG CCACGAGCCG
ATCGAGGAAG CCATCATCGA TGTCGACGAC GAATATACCG GCGCGGTGAT CGACAAGCTG
ACCGGGACCC GTAAGGGCGA CCTGGTCGAG ATGAAGCCCG CCGGCCACGG CAAGACCCGC
ATCGTCGCCC ATGTCCCCTC GCGCGGGTTG ATCGGCTACC AGGGCGAGTT CATGACCGAC
ACCCGCGGCA ACGGCGTGCT GAACCGCATC TTCCACAGCT GGGCGCCCTA CAAGGGCGCG
ATCCAGGGTC GGCGCCAGGG CGTTCTGATC TCGATGGAGG ACGGGGTTTC CGTGGCCTAT
GCGCTGTGGA ACCTGGAAGA GCGCGGCAAG ATGTTCATCG GCGCGCAGGA GCAGGTCTAC
CAGGGCATGA TCATCGGCGA GCATTCGCGC GACAACGACC TGGAGGTGAA CCCGCTCAAG
GGCAAGAAGC TGACCAACGT GCGTGCCTCG GGCACGGACG AGGCGGTGCG CCTGACGCCC
CCGGTGCGCA TGTCGCTGGA AGAGGCCATC GCCTATATCG ACGATGACGA ACTGGTCGAG
GTGACGCCCA AAAGCATCCG CCTGCGCAAG CGCTATCTGG ACCCGCACGA GCGCAAGCGC
CAGTCCCGCA GCGAAGGCTG A
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| Protein sequence | MDIRNIAIIA HVDHGKTTLV DQLLKQSGSF RENQAVAERV MDSNDIERER GITILAKATS
VEWKGTRINI VDTPGHADFG GEVERILSMV DGVCLLVDAA EGPMPQTKFV TSKALALGLR
PIVVLNKVDK PAADPDKALD EVFDLFANLG ASDEQLDFPH LYASGIGGWA DETLEGPRKD
MSALFDLVLR HVEAPRQISR QDEPFQMLAT TLGADPFIGR ILTGRVEAGR AKAGDTIKAL
SRDGERIEQF RVSKVLAFRG LTQQPIDEAV AGDIVTIAGM SKATVADTLC ALEVETALPA
QPIDPPTISV TFGINDSPLA GRDGNKVQSR VIRERLMKEA ETNVAIKVED TPGGDAFVVS
GRGELQMGVL IENMRREGFE LSISRPRVIF RDIDGVRHEP IEEAIIDVDD EYTGAVIDKL
TGTRKGDLVE MKPAGHGKTR IVAHVPSRGL IGYQGEFMTD TRGNGVLNRI FHSWAPYKGA
IQGRRQGVLI SMEDGVSVAY ALWNLEERGK MFIGAQEQVY QGMIIGEHSR DNDLEVNPLK
GKKLTNVRAS GTDEAVRLTP PVRMSLEEAI AYIDDDELVE VTPKSIRLRK RYLDPHERKR
QSRSEG
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