Gene Pden_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4013 
Symbol 
ID4582564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1160292 
End bp1160924 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID639771322 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_917775 
Protein GI119386720 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.648921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ACATCCGGTT CGCCGTCAAG GTCTTCGCGG CCTTGTTCGC GATCATGAAC 
CCGATTGCGA ATGTCCCGAT CTTCCTGCCC CTGACCGAAG GCGGCAGCGA CGCCCAACGG
CATCGCACCG CCGTCGTGGC GATCATCGCG GTCGGCATCG GCTGCGTGGT CTCGGCGCTG
GCCGGGGGTG CGGTGCTGTC GGCCTTCGGC CTGACGGTGG ATGATTTCCG CCTTGCGGGC
GGGCTGATGG TGCTGCTGAT CGCGCTGTCG ATGCTGAACG GGTCCGCCAG CGCGCAGCAC
AAGCCCGCGG ATCACGAGAT CGACGGGACC GCTCCTTCGG TCGCGATCTA TCCGCTTGCG
GTCCCGCTGC TGGTCGGACC CGGCACCATC GCCACGCTGA TCGTCTTTGG CCATGCCGCG
ATCTCGCAGG GGCTCGAGAT CGGGCTGGCG CTTGGCCTTG GCGGTTTCCT GGTGGTTCTG
GCGGCGGCGC TTCTGACGGC GCCGTGGCTC GGCCATCATC TTTCCGCACA GGCGACGGCC
GTCACCCGCC GGCTGATGGG CATGCTTCTG GCCGCCATCG CCGTCGAGAT GATGACGACC
AGTATCAGGG CCTTGTTCCT GTCGGGGCGA TAG
 
Protein sequence
MADDIRFAVK VFAALFAIMN PIANVPIFLP LTEGGSDAQR HRTAVVAIIA VGIGCVVSAL 
AGGAVLSAFG LTVDDFRLAG GLMVLLIALS MLNGSASAQH KPADHEIDGT APSVAIYPLA
VPLLVGPGTI ATLIVFGHAA ISQGLEIGLA LGLGGFLVVL AAALLTAPWL GHHLSAQATA
VTRRLMGMLL AAIAVEMMTT SIRALFLSGR