Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4008 |
Symbol | |
ID | 4582559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1150919 |
End bp | 1152289 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771317 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_917770 |
Protein GI | 119386715 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.704595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACCG AAGCCGACTC GGTGCCCGCA CCCCAGGGCG CCCCCGATGA CGCACTTGCG CAAGCCACCA TCCTCGTGAT CGAGGACGAG CCGGGGATGC GGAACTTTCT GGAACGGATC CTGGCCTCGA AATGCCGCGG CATCCGGCTG GCCGCGAATA CGGCGGAAGC CAGCGCCCTG ATCGCCGAGA CGGCTTTCGA TCTGGTCATC CTCGACAATC TGATGGAGGG TCAGCGCGGC GTGGACTGGC TGCGCGAACA GCGCCCGCAG GGCTTTTTCC CGCCCGCGAT CCTGATGACC GCCTATGCCG ATCTGGAAAC CGCCATCCAG GCGCTGCAGG CCGGCGCCTC GGATTTCCTG CTGAAGCCCT TTCGCGCCAA TCAGTTGCTG AACACCATCA ACCGCTGCCT GGAGGGCGAA AGGCTGCGGC GCGAGAACCT GATCCTGCAA CAGGAGTTGC GCAACAACGT CGATCTGGGC CGGCTGCGGA ACGAGTTGAT CGGCACGTCG CCCGCCATCG AGCGCGTGAG GCAGGTGATC GCCCGCGTGG CGCCGGCGCC GTCCTCGGTG CTGATCACCG GCGCCTCGGG CTCGGGCAAG GAGGTGGCGG CGCGGATGAT CCACACGCTG TCCGAGCGCG CGCAGATGCC GTTTGTCGCG GTGAACTGCG CCGCCATCCC GCACGACATG CTGGAGGACG AACTTTTCGG CCATATCAAG GGCGCGTTTC CCGGCGCCGA CAGGAATCGC GAGGGGCTGT TCACCTCTGC GCGCGGCGGG ACGCTGTTTC TGGACGAGAT CGCCGGATTG CCCGTCGCCC TGCAAGCCAA GCTCTTGCGC GCGATCGACG ATCGCCGCAT CCGGCCCTTG GGATCGGAAC GCGAAACGAC GGTCGACCTG CGCCTGATCT TTGCCGCAAA TACCGATCTG GACCGGGCCG TGGCCGAGGG CCGGCTGCGC GCGGACCTGC TTTATCGCAT CAACGTGCTG CATATCCACA TGCCGGCGCT GAAAGAGCGC GGCGCCGACA TGTTCGACCT GGCGGCGATG TTCATGGACA GCCTGTCCCG GAACCTGGCC ATGCCCAAGA TCCCGATCAC CCCCGAGGTG CGCGCAACCA TGGCGACCTA TGACTGGCCG GGCAATGTGC GCGAGTTGCG CAACGCCATC GAGCGCGCGT TGATTCTGGG CCGCTTCACC CCGCTGACGG CCACCGTGGG CAACAATGAC GGCCACACCC TTGCCGAGAT CGAACGCCGC GCGATCCTTG GCGCCGTGGC GGCCTTCGAC GGCGACCGCG AGGCGGCGGC CGCCCGGCTG GGCATCTCGC GCAAGACCAT CGACCGCAGG CTGGCGGACT GGAATGCCTG A
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Protein sequence | MRTEADSVPA PQGAPDDALA QATILVIEDE PGMRNFLERI LASKCRGIRL AANTAEASAL IAETAFDLVI LDNLMEGQRG VDWLREQRPQ GFFPPAILMT AYADLETAIQ ALQAGASDFL LKPFRANQLL NTINRCLEGE RLRRENLILQ QELRNNVDLG RLRNELIGTS PAIERVRQVI ARVAPAPSSV LITGASGSGK EVAARMIHTL SERAQMPFVA VNCAAIPHDM LEDELFGHIK GAFPGADRNR EGLFTSARGG TLFLDEIAGL PVALQAKLLR AIDDRRIRPL GSERETTVDL RLIFAANTDL DRAVAEGRLR ADLLYRINVL HIHMPALKER GADMFDLAAM FMDSLSRNLA MPKIPITPEV RATMATYDWP GNVRELRNAI ERALILGRFT PLTATVGNND GHTLAEIERR AILGAVAAFD GDREAAAARL GISRKTIDRR LADWNA
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