Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3949 |
Symbol | |
ID | 4582500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1084712 |
End bp | 1085308 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639771258 |
Product | HNH endonuclease |
Protein accession | YP_917711 |
Protein GI | 119386656 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACG ACCATGGCGA ATTCCGAACC CAATTCGTGC GCGAGCCATC CTTCTTGCGC CACCATCCCG CACTGGTCCT AAACGCCGAT TTCAGACCGC TCAGCTATTA TCCGCTGTCG CTCTGGCCCT GGCAGGAGGC GGTGAAGGCG GTGTTCCTGG ACCGTGTCCA GATCATCGCC GAATATGACG AGGTGGTGCG CAGCCAGCAT CACGCGATAC GCATCCCCTC GGTCGTCGTG CTGAAAGACT TCGTCAAACC CCAGAAGCGC GTGGCATTCA CGCGCTTCAA TCTTTTTCTG CGGGACGAAT TCTGCTGCCA GTATTGCGGT GCGAAGGGCG AGTTGACCTT TGACCATGTC CTGCCGCGCT CGCGCGGAGG GATCACCAGT TGGGAGAATG TTGTCGCCGC CTGTTCGCCC TGCAACCTGA GGAAGGCCAA CAAACTGCTG AAGAATTCGG GACTTAGGCT GCGTCGCCCG CCTCGCCGGC CCACGCCGGA GGAGATGCAC GCCATCGGCC GGCGCTTCCC GCCCAACCAT CTGCACGACA GCTGGATGGA TTTTCTCTAC TGGGATACGG AGCTGATTGC GGAGTAG
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Protein sequence | MLDDHGEFRT QFVREPSFLR HHPALVLNAD FRPLSYYPLS LWPWQEAVKA VFLDRVQIIA EYDEVVRSQH HAIRIPSVVV LKDFVKPQKR VAFTRFNLFL RDEFCCQYCG AKGELTFDHV LPRSRGGITS WENVVAACSP CNLRKANKLL KNSGLRLRRP PRRPTPEEMH AIGRRFPPNH LHDSWMDFLY WDTELIAE
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