Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3933 |
Symbol | |
ID | 4582484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1069721 |
End bp | 1070734 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771242 |
Product | AraC family transcriptional regulator |
Protein accession | YP_917695 |
Protein GI | 119386640 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACC TCGATCCAGC AACGCCCCCC GTCCCGGGGC AGATCACGGC GCCTTCCGGG GCCCAGGCGC TGCGCTATGT CTTCCTGTTG CTGGACCGTT TCACCATGGT TTCCTTTGCC GCCGCCATCG AGCCTTTGCG GCTGGCGAAC CGGCTGGCCG GGCGCGAACT TTACCAGTGG CGGCTGATCG GCGAACAGGG CGAGACCGCG CTTTGCTCGA ACGGTGCGCG CATCCTGCTG GACGGCCCGC TGTTTGAAAC CCGGCGCGAC GACACGGTGC TGGTCTGCGG CGGGCTCGAC GTGGCGCGGG CCGCGACGAG GCCGGTTCTG GCCTGGCTGC GGCGCGAGGC GCGGCGCGGC ACCCGGATCG GCGCGCTGTG CACCGGCGCC TGGGTGCTGG CCGAGGCCGG GCTGCTCGAC GGGCGCCGCG CCACCATCCA TTGGGAAAAC CAGGACGGTT TCGCCGAGAA ATTCCCCGAT GTCACCCTGA TCCGCACCGT CTTCGTCGAG GACGGCAGCC GGCTGACCGC CGCCGGGGGC ACCGCCGCCA TCGACCTGAT GCTGCGCCAG ATCGCCCGCG ACCACGGCGC CGAACTGGCG GGGCGGGTGG CCGACCAGAT GATCCATACC GCGATCCGCT CGGAAGAGGA CCAGCAGCGC CTGTCCAGCC CGACCCGCAT GGGCGCGCGC CATCCCCGGC TGGCGCAGGT CCTGGCCCGG ATGGAGGCCA ATATCGAAGA GCCGGTCAGC CCGGCGCGGC TGGCCGCCGA GGCGGGCCTG TCGCCGCGCC AGCTCGAACG GCTGTTCGCG CGCTATCTCG GCCGCTCGCC CAAGCGCTAC TATATGGAAC TGCGGCTGGA ACGCGCCCGC CACCTGCTCT TGCAGACCGG GATGAGCGTG ATGGAGATCG CGCTGGCCTG CGGCTTCGCC TCGACCGCGC ATTTCTCGAA ATGCTACCGT GCGACCTATG GCTGCACCCC GTATCGCGAA CGCGGCGCGG CGGGCGCCGG CTAA
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Protein sequence | MPDLDPATPP VPGQITAPSG AQALRYVFLL LDRFTMVSFA AAIEPLRLAN RLAGRELYQW RLIGEQGETA LCSNGARILL DGPLFETRRD DTVLVCGGLD VARAATRPVL AWLRREARRG TRIGALCTGA WVLAEAGLLD GRRATIHWEN QDGFAEKFPD VTLIRTVFVE DGSRLTAAGG TAAIDLMLRQ IARDHGAELA GRVADQMIHT AIRSEEDQQR LSSPTRMGAR HPRLAQVLAR MEANIEEPVS PARLAAEAGL SPRQLERLFA RYLGRSPKRY YMELRLERAR HLLLQTGMSV MEIALACGFA STAHFSKCYR ATYGCTPYRE RGAAGAG
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