Gene Pden_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3838 
Symbol 
ID4582389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp972636 
End bp973571 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID639771147 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_917600 
Protein GI119386545 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC TTTCCTGTGG CCTCAAGAAT CACCGGAACA AAGACATGTC CCCGAAACAA 
GCCTTGGCTC TTCTCCGCTC TGACCACGAC GATGGTGCCA CGGTTCATCG CTTGGAGCGA
GACGCGAAAG CCGAGATCGC TTGCGAGCAC AATCTCAAGT TCATGCGTCG TTTGCCTGAC
GAATCCATGA GCCTGATCGT GACGTCACCG CCCTACAACA TTGGAAAGTC TTATGAAAAG
CGCACATCGC AAGAAAAATA TGTTGAGGAT CAGGCGGCGT GCATTGCCGA AGCCGTACGT
CTGCTCGCGC CAAACGGGTC CATCTGCTGG CAGGTTGGCA ACCACGTTGA CTCAGGCGAG
ATATTCCCGC TAGACATCCT TCTCTACCCG CTCTTTAAGC ACCACGGCCT GCAACTCCGC
AATCGAATTG TTTGGACGTT CGGTCATGGG CTGCACTGCC AGAAGCGCTT TTCGGGTAGG
CATGAAACGA TTCTATGGTT CACCAAATCT GAGGACTACA CGTTCAACCT AGATCCTGTC
CGCGTCCCCT CGAAGTATCC GAACAAAAAG CACTTCAAAG GTCCGAACAA GGGCGAGCTT
TCCAGCAATC CTCTTGGAAA GAACCCTTCC GATGTTTGGG ATATTCCCAA TGTCAAATCC
AACCACGTTG AAAAGACCGA TCATCCTTGC CAGTTCCCCA TCGGACTGGT GGAGAGATTG
GTGTTGGCTT TGACAAACGA AGGCGAGAGC GTCCTCGATC CTTATCTTGG CGTTGGTTCG
TCCGCGATTG CAGCGTTGAA GCATGGAAGA CATGCCTACG GCTGCGATCT CGATAAAGCC
TATGTCGATA TTGCATGGGA TCGTATTCAC CAGCTGCGCG CAGGTACGCT CCGCACCCGC
CCGATGAACA AACCCGTCTA TGACCCCAAT GCTTAG
 
Protein sequence
MPHLSCGLKN HRNKDMSPKQ ALALLRSDHD DGATVHRLER DAKAEIACEH NLKFMRRLPD 
ESMSLIVTSP PYNIGKSYEK RTSQEKYVED QAACIAEAVR LLAPNGSICW QVGNHVDSGE
IFPLDILLYP LFKHHGLQLR NRIVWTFGHG LHCQKRFSGR HETILWFTKS EDYTFNLDPV
RVPSKYPNKK HFKGPNKGEL SSNPLGKNPS DVWDIPNVKS NHVEKTDHPC QFPIGLVERL
VLALTNEGES VLDPYLGVGS SAIAALKHGR HAYGCDLDKA YVDIAWDRIH QLRAGTLRTR
PMNKPVYDPN A