Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3716 |
Symbol | |
ID | 4582268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 864089 |
End bp | 865381 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639771026 |
Product | citrate synthase I |
Protein accession | YP_917479 |
Protein GI | 119386424 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.364105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0570227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG GAAAAACCGC AAGGCTGCAT CTCGAGGGCA AGGACTACGA CCTCGCGGTC CTGTCCCCGA CCGCGGGACC GGATGTGGTC GATATTCGCA AGCTCTACGG CGACGCGGGT GTCTTCACCT ACGACCCCGG CTTCACCTCG ACGGCGTCCT GCGATTCGAC GATCACCTAT ATCGACGGTG ACAAAGGCGA GCTGTGGTAT CGCGGCTATC CGATCGAGCA GTTGGCGGCG CAATCGCATT ACCTCGAGGT CTGCTACCTG CTGCTCTATG GCGAGCTGCC GAACCCCGAC CAGTTGCTCG ACTTCGAGAC CCGGGTCACC CGCCACACCA TGGTGCACGA GCAGATGCAC TATTTCTTCC GCGGCTTCCG CCGCGACAGC CATCCGATGG CGACCATGGT CGGCGTGGTC GGTGCGATGT CGGCCTTCTA TCACGACTCG ATCGACATCA ACGATCCGGT GCAGCGCGAG ATCGCCTCGA TCCGGCTGAT CGCCAAAGTG CCGACCATCG CCGCGATGGC CTATAAGTAT TCGCTGGGCC AGCCCTTCGT CTATCCGCGG AACGAGCTGG ATTATGCCAG CAATTTCCTG CACATGTGCT TCTCGGTTCC GGCCGAGCCC TATCATGTCG ATCCGGCGCT GTCGCGCGCC ATGGACCGCA TCTTCACCCT GCATGCCGAT CACGAGCAGA ACGCCTCGAC CTCGACCGTT CGCCTGGCGG GTTCCTCGGG CGCGAACCCG TTCGCCTGCA TCGCCGCCGG CATCGCCTGC CTCTGGGGCC CGGCGCATGG CGGCGCCAAC CAGGCCTGCC TGGAGATGCT GCGCGAGATC GGCTCGGTCG AGCGCATCCC GGAATTCCTC GCCCGCGCCA AGGACAAGAA CGATCCGTTC CGCCTGATGG GCTTTGGCCA CCGGGTCTAC AAGAACTTCG ACCCGCGCGC CAAGGTGATG AAGGAATCGG CCGACGAGGT GCTGGACCTT CTGGGCGTCC ACAACAACCC GACGCTGCAG GTCGCCAAGG AACTGGAGCG GATCGCGCTG GAGGACGAGT ATTTCGTCTC GAAAAAGCTC TATCCGAACG TCGATTTCTA CTCGGGCATC ATCCTCGAGG CGATGGGCTT CCCGACCTCG ATGTTCACGC CGATCTTCGC ACTGTCGCGC ACCGTCGGCT GGATCTCGCA GTGGAAGGAG ATGATCGCCG ATCCGCAGAA CAAGATCGGC CGGCCGCGCC AGCTTTACGT CGGCGCCCCC CGGCGCGACT ACAAGCCGCT GGACCAGCGC TGA
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Protein sequence | MAEGKTARLH LEGKDYDLAV LSPTAGPDVV DIRKLYGDAG VFTYDPGFTS TASCDSTITY IDGDKGELWY RGYPIEQLAA QSHYLEVCYL LLYGELPNPD QLLDFETRVT RHTMVHEQMH YFFRGFRRDS HPMATMVGVV GAMSAFYHDS IDINDPVQRE IASIRLIAKV PTIAAMAYKY SLGQPFVYPR NELDYASNFL HMCFSVPAEP YHVDPALSRA MDRIFTLHAD HEQNASTSTV RLAGSSGANP FACIAAGIAC LWGPAHGGAN QACLEMLREI GSVERIPEFL ARAKDKNDPF RLMGFGHRVY KNFDPRAKVM KESADEVLDL LGVHNNPTLQ VAKELERIAL EDEYFVSKKL YPNVDFYSGI ILEAMGFPTS MFTPIFALSR TVGWISQWKE MIADPQNKIG RPRQLYVGAP RRDYKPLDQR
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