Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3667 |
Symbol | |
ID | 4582219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 815398 |
End bp | 816633 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770977 |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_917430 |
Protein GI | 119386375 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTACT GCCGGCTGCG TCTTTTGGCC GCGACGAAAC GCCTGCCCGG CGGCGATTGC CTCGGGGCGG CGGCTGACCT AAATCTGGCG GCCATGACGA TACCCGCCAC ATATGCCGCC ATCATCACCG CCGCCGGCCG CGGCACCCGC GCCGGCGACG GCCCGCCCAA GCAATGGCGC CCCCTTGCCG GGCAAAGCGT GCTGGAGCGC AGCATCGCCG CCTTTGCCGG CTTTCCCCGC GTCGTGGTGA CGCTGGCGCC CGAGGACATG GCGCGCGGCG TGGCCGAGCT TTCCGGCCCC GTGGTGCTGG TCGCGGGCGG CGCCACGCGC AGCGACAGCG TGCGCGCGGC GCTGGAAAGC CTCGAGGGCA GCGGCGTGAC CCATGTGCTG ATCCATGACG GCGCCCGGCC GCTGGTCTCG CGCCGCGTGA TCGGGGGCGT CATCGAGGCG CTGCAATCCG GCGCCCCGGC CGCCGCCCCC GCCCTGCCCG TCACCGACGC GCTGTGGCGG GCCCAGGACG GGTGCGTCAC CGCCACCGCC AGCCGCGAGG GGCTGTTTCG CGCCCAGACC CCGCAGGGTT TCGCGCTGGA CGCCATCCTT GCCGCGCATC GCGCCCATCC CGAGGGCGCG GCGGACGACG TGGAACTGGC GATCCGCGCC GGCCTGCCGG TCACGGTGAC GCCGGGCGAC GAGGACAATC TGAAACTGAC CTGGCCCGGC GACTTCGCCC GGGCCGAGCG TATCCTGGGG GACGCGATGG ACATCCGGCT TGGCAACGGT TTCGACGTGC ATGCCTTCAC CACGGGCGAC CATGTCTGGC TTTGCGGGGT GAAGATCCCG CATGACAAGG CACTCTTGGG CCATTCCGAC GCCGATGTCG GCATGCATGC CCTGACCGAC GCGATCTACG GCGCGCTGGC GCAGGGCGAT ATCGGCCGGC ACTTCCCGCC CTCGGACCCG CAATGGAAGG GCGCGGAAAG CCATATCTTC CTGCGCCATG CCGCGATGCT GGCCCGGCAG ATGGGCTATG AGATCTCGAA TGCCGACGTG ACGCTGATCT GCGAGCGGCC CAAGGTCGGC CCCCATGCCG GCGCCATGGC GCTGCGGCTG TCCGAGATCA TCGGCGTCGA GCCCGACCGG GTCAGCGTCA AGGCCACCAC ATCGGAACGG TTGGGCTTTA CCGGGCGCGA GGAAGGCATC GCCTCCATCG CCACCGCCAC ATTGGTCAAG GGGTAG
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Protein sequence | MGYCRLRLLA ATKRLPGGDC LGAAADLNLA AMTIPATYAA IITAAGRGTR AGDGPPKQWR PLAGQSVLER SIAAFAGFPR VVVTLAPEDM ARGVAELSGP VVLVAGGATR SDSVRAALES LEGSGVTHVL IHDGARPLVS RRVIGGVIEA LQSGAPAAAP ALPVTDALWR AQDGCVTATA SREGLFRAQT PQGFALDAIL AAHRAHPEGA ADDVELAIRA GLPVTVTPGD EDNLKLTWPG DFARAERILG DAMDIRLGNG FDVHAFTTGD HVWLCGVKIP HDKALLGHSD ADVGMHALTD AIYGALAQGD IGRHFPPSDP QWKGAESHIF LRHAAMLARQ MGYEISNADV TLICERPKVG PHAGAMALRL SEIIGVEPDR VSVKATTSER LGFTGREEGI ASIATATLVK G
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