Gene Pden_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3638 
Symbol 
ID4582190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp788787 
End bp789287 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID639770948 
Productappr-1-p processing domain-containing protein 
Protein accessionYP_917401 
Protein GI119386346 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.346618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.96391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCT CCACCCGGCA AGGCGACATC ACCCGGCTCG CCGTCGATGC CATCGTCAAT 
GCGGCCAATC GCACGCTGCT GGGCGGCGGC GGCGTCGACG GCGCCATCCA CCGCGCGGCC
GGCCCGTTAC TCCTCGAGGA ATGCCGCACC CTGGGCGGCT GCCCCACCGG CGAGGCCCGG
ATCACCGGGG GCTACGACCT GCCGGCAAGA TACGTCATCC ACGCCGTCGG CCCGGTCTGG
CAAGGCGGCA TGGCGGGCGA GGACGCGCTG CTCGCCGGCG CCTACCGCCA CAGCCTGCTG
CTTGCGCAGG CCCACGACCT TGCCCGGATC GCCTTCCCGG CGATCTCGAC CGGCATCTAC
GGTTTTCCGG CCGAACGTGC CGCTCGCATC GCCGTCGCGA CCATCCTCGA CCATGCCGCC
GATATCGAGG TGATCCTGGT CGGCTTCGAC GGCCCCGGCC ATGCGACGCT CCGGCAAGCC
GTGGAAGAGG CCCGCCGATG A
 
Protein sequence
MRISTRQGDI TRLAVDAIVN AANRTLLGGG GVDGAIHRAA GPLLLEECRT LGGCPTGEAR 
ITGGYDLPAR YVIHAVGPVW QGGMAGEDAL LAGAYRHSLL LAQAHDLARI AFPAISTGIY
GFPAERAARI AVATILDHAA DIEVILVGFD GPGHATLRQA VEEARR