Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3629 |
Symbol | hemE |
ID | 4582181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 780469 |
End bp | 781497 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770939 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_917392 |
Protein GI | 119386337 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.204246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA AAACCATCCT GCGCGCGCTG AAGGGCGAGC GTTTGCCCGT CCCGCCTGTC TGGATGATGC GCCAGGCCGG CCGCTACCTG CCGGAATACC GCGCCACCCG CGCCCAGGCC GGCGACTTTT TGTCGCTGTG CTACACGCCG GACCTGGCGG CCGAGGTGAC GCTGCAACCG ATCCGCCGCT ATGGTTTCGA CGCGGCGATT CTCTTTGCCG ACATCCTGCT GCTGCCGCAG GCGCTGGGGC TCGACCTGTG GTTCGTGACC GGCGAGGGGC CGCGGCTCTC GACCGTGACC AGCGCCGCAG GGGTCGCGGC CCTGAAACCC GCCGCCGCGA TCCACGACAC GCTGTCGCCG GTCTATGAAA CCGTCCGCAT CCTGGCGCGC GAACTGCCGC GCGAGACCAC GCTGATCGGC TTTGCCGGCG CGCCCTGGAC CGTCGCGACC TACATGGTCG CCGGCCGCGG CACCCCCGAC CAGGCCCCCG CCCACGCCTT CAAGGCCGAG GACCGCGCCG CCTTCGCCGC CCTGATCGAC CGGATCACCG AGGCGACCAT CGACTATCTC TCGGCCCAGA TCGAGGCCGG GGCCGAGGTG GTGAAGCTGT TCGACAGCTG GGCCGGTTCG CTCAAGGGCC GGGACTTCGA CGATTTCGCG GTCGAGCCCG CGCGCCGGAT CATCGCCGCG CTCAAGGCGC GCCATCCCGG CATCCCGGTG ATCGCCTTCC CGCGCGAGGC CGGGCCGCGC TATGCCGGCT TCGCCCGCGC GACGGGGGCC GATTGCGTGG CGCTGGACAA TTCGGTCAGC GCCGACTGGG CGGCCGCCGA GGTGCAAAAG GACGGCTGCG TGCAGGGCAA TCTCGACCCG CGCCTGCTGG TCAGCGGCGG CGAGGAGCTC GTCTCCGAAA CGCGCCGGAT CGTGCAGGCC TTCTCGCGGG GTCCGCATAT CTTCAACCTC GGCCATGGCA TCACCCCCGA GGCCGATCCC GAGAACGTCG CGCGGATGCT GGAGGCGATC CGGGGCTGA
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Protein sequence | MSEKTILRAL KGERLPVPPV WMMRQAGRYL PEYRATRAQA GDFLSLCYTP DLAAEVTLQP IRRYGFDAAI LFADILLLPQ ALGLDLWFVT GEGPRLSTVT SAAGVAALKP AAAIHDTLSP VYETVRILAR ELPRETTLIG FAGAPWTVAT YMVAGRGTPD QAPAHAFKAE DRAAFAALID RITEATIDYL SAQIEAGAEV VKLFDSWAGS LKGRDFDDFA VEPARRIIAA LKARHPGIPV IAFPREAGPR YAGFARATGA DCVALDNSVS ADWAAAEVQK DGCVQGNLDP RLLVSGGEEL VSETRRIVQA FSRGPHIFNL GHGITPEADP ENVARMLEAI RG
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