| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3619 |
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| Symbol | ispH |
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| ID | 4582171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 772316 |
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| End bp | 773266 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770929 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_917382 |
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| Protein GI | 119386327 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA AACCGCCCCT GACCCTCTAT CTCGCCGCGC CGCGCGGATT CTGCGCCGGC
GTGGACCGCG CCATCAAGAT CGTCGAGATG GCGCTGCAGA AATGGGGCGC GCCGGTCTAT
GTGCGCCACG AGATCGTGCA TAACAAGTTC GTCGTGGACT CCCTGCGCGA CAAGGGCGCG
GTCTTCGTCG AGGAACTGGA CGATGTGCCC TCCGACCGGC CGGTGATCTT CTCGGCCCAT
GGCGTGCCCA AGGCGGTGCC GGCCGAGGCA CGGCGGCGCG AGATGGTCTT CGTCGACGCC
ACCTGCCCGC TGGTCAGCAA GGTCCATGTC GAGGCCGAGC GCCATCACGC CGAGGGCTTG
CAGATGGTGA TGATCGGCCA TGCCGGCCAT CCCGAGGTGC TGGGCACCAT GGGGCAACTG
CCCGAGGGCG AGGTGCTGCT GGTCGAGACA GTCGAGGACG TGGCGCGGAT CGAACCGCGC
GACCCCGGGC GACTGGCCTT CATCACCCAG ACCACGCTCT CGGTCGACGA CACCGCCGCC
ATCGTCGCCG CCTTGCAGGC GCGGTTTCCG GGCATCAGGG GCCCGGCCAA GGAGGATATC
TGCTATGCGA CGACGAACCG GCAGGCCTCG GTCAAGGCCA TCGCCGGGCG GATCGACGCG
CTGCTGGTGA TCGGGGCGCC GAACAGTTCC AACTCGCGCC GGCTGGTCGA GGTGGGCAGC
GCCGCCGGCT GCGCCTATTC GCAACTGGTG ATGCGGGCCG ACCAGATCGA CTGGCGGGCC
ATCGCGGGCG CGCGTGCGGT GGGCGTGACC GCCGGCGCAT CGGCCCCCGA GGTGCTGGTC
GACGAGGTGG TCGCGGCCTT TCATGCGCGT TATGACCTGA CGGTCGAGAT GGTCGAGACG
GCGCGCGAGA ATGTCGAGTT CAAGGTGCCG CGGGTCTTGC GCGAGGCCTG A
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| Protein sequence | MDKKPPLTLY LAAPRGFCAG VDRAIKIVEM ALQKWGAPVY VRHEIVHNKF VVDSLRDKGA
VFVEELDDVP SDRPVIFSAH GVPKAVPAEA RRREMVFVDA TCPLVSKVHV EAERHHAEGL
QMVMIGHAGH PEVLGTMGQL PEGEVLLVET VEDVARIEPR DPGRLAFITQ TTLSVDDTAA
IVAALQARFP GIRGPAKEDI CYATTNRQAS VKAIAGRIDA LLVIGAPNSS NSRRLVEVGS
AAGCAYSQLV MRADQIDWRA IAGARAVGVT AGASAPEVLV DEVVAAFHAR YDLTVEMVET
ARENVEFKVP RVLREA
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