Gene Pden_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3546 
Symbol 
ID4582101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp694390 
End bp694821 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content71% 
IMG OID639770859 
ProductMarR family transcriptional regulator 
Protein accessionYP_917312 
Protein GI119386257 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.212621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.456883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCG ATCTGGACCG GTTCCTGCCC TATCGCCTGT CCGTGGCGGC CGCGCGGCTG 
AGCCGCCGCT TTGCCGCGCT TTACGAGGCC GAAGCGGGGC TGAGCACGCC CGAATGGCGG
GTTCTGGCGC ATCTGGCCCA TTCCGGCGCG GTGAGCGTGC GCGACATCAC GGCGCGGGTG
CATCTGGACA AGTCGATGGT CAGCCGCGCC GCCTCGCGGC TGCAAGAGGC GGGGCTGGTG
CGGAAATCGG GCAACGCGGC CGACCGCCGG CTGGTCGCGC TGGAGCTGAC GCCTGCGGGC
CGGGCGCTGA TGGCGCGGCT CGGCCGCATC GCCGAGGCCT TCCAGGCGGA CCTGCTGGCC
GAGCTGGGAC CGGAGGCCGA AGCCCTCGAC CGCGCCCTCG CCAAAATCGA CCAAAGGGAA
AACCGCGACT AA
 
Protein sequence
MSFDLDRFLP YRLSVAAARL SRRFAALYEA EAGLSTPEWR VLAHLAHSGA VSVRDITARV 
HLDKSMVSRA ASRLQEAGLV RKSGNAADRR LVALELTPAG RALMARLGRI AEAFQADLLA
ELGPEAEALD RALAKIDQRE NRD