Gene Pden_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3501 
Symbol 
ID4582056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp646964 
End bp647896 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID639770814 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_917267 
Protein GI119386212 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0533483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC AGATCAAGGG CCTGCATCAC GTCACGTCGA TGGCTGCGGA TGCCCGGCAG 
AACAACGCCT TCTTCACCGA TACGCTGGGC CTGCGCCGGG TGAAGAAGAC GGTGAACTTC
GATGAGCCCA GCGTCTATCA CCTCTATTAC GGCGACGAGG TCGGCACGCC CGGCTCGGTG
ATGACGTATT TCCCCTTTCC GGATCTGATG CGCGGCCGGC CCGGCGTCGG AGAGGTGGGC
GAGACCCAGT TCTCGGTGCC CAAGGGGGCG CTGGGTTTCT GGCAGGACCG GCTGGCGGCC
AAGGGGGTGA CCGGGCTGGA ACTGGACAAG ACCTTCGGCG CCGAACGCCT GCGTTTTCAG
GGGCCTGACG GCGACGGGTT CGCGCTGATC GAAAGTGTCG ACGACCTGCG CACGCCCTGG
ACCGAAGGCG GCATCGCCGA GGAGGCCGCC ATCCGTGGCT TCAGCGGCGC AAGGCTGCGG
CTGCACGATA CCGCGGCGAC GGCGGAACTG CTGGGCTTCA TGGGCTATCA GCGCGCCGGG
GCCGAGGGCG ACGTGACCCG CTTCGTCATT CCCGGCGGGA ACGGTGCCGA CGTGATCGAC
CTAGAGGCGC TGCCGCAGGC GCAATTCGCC CGGCAGGGGG CCGGCTCGGT GCACCACATC
GCCTTTGCCG TTCCGGATCG GGCGGCTCAG CTTCAGGTGC GCAAGGCGCT GATGGATACC
GGCTACCAGG TCACGCCGGT GATCGACCGC GACTATTTCT GGGCGATCTA TTTCCGCACG
CCCGGCGGCG TGTTGTTCGA GATCGCCACC AACGAGCCCG GCTTCGATCG GGACGAGGAT
ACGGCCCATC TGGGCGAGGC GCTGAAGCTG CCGACCCGCT ACGAACCCTA TCGCGACAAG
ATCGAGGCGC ATCTGGTTTC CCTCGCCGCC TGA
 
Protein sequence
MLDQIKGLHH VTSMAADARQ NNAFFTDTLG LRRVKKTVNF DEPSVYHLYY GDEVGTPGSV 
MTYFPFPDLM RGRPGVGEVG ETQFSVPKGA LGFWQDRLAA KGVTGLELDK TFGAERLRFQ
GPDGDGFALI ESVDDLRTPW TEGGIAEEAA IRGFSGARLR LHDTAATAEL LGFMGYQRAG
AEGDVTRFVI PGGNGADVID LEALPQAQFA RQGAGSVHHI AFAVPDRAAQ LQVRKALMDT
GYQVTPVIDR DYFWAIYFRT PGGVLFEIAT NEPGFDRDED TAHLGEALKL PTRYEPYRDK
IEAHLVSLAA