Gene Pden_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3491 
Symbol 
ID4582046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp638222 
End bp639010 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID639770804 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_917257 
Protein GI119386202 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.323872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.346177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACGA TCATGGCAAA CGGCGCGGAT CTGCATGTCG CGGTGTCGGG ACCGGAAACC 
GGGCCGGCGG TGGTCTTTGC GAATTCGCTG GGCACCGACC TGCGGGTCTG GGACGGGCTG
ATCCCGCATC TGGCGCCGGG CCTGCGGCTG GTGCGCTATG ACAAGCGCGG CCACGGGCTG
TCCCAGGAAA CGTCCGGCCC CTACGGCATC GAGATGCTGG CCGACGACGC CGCGGCGCTG
ATCTCGGCGC TGGGGCTGGG GCGGGTGGTC TTCGTGGGCC TGTCCATCGG CGGGCTGATC
GGCCTGTCGC TGGCCGCCCG CCATCCGGGC CTGCTGGCGG GGCTGGTGGT GTCGAACTCG
GCCGCCAGGA TCGGCGATGC GGCGATGTGG AACGCCCGGA TCCAGGCGAT CCGCGACGAG
GGGCTGGCCA GTATCGCGGC GCCGACGATG GAGCGCTGGT TCTCGCCCGC CTTCCGGGCC
AAGGGGCTTG ACGCGCCTTG GCGCCGGATG CTCGCCCGAC AGCCGCAGGG GGGCTATGTC
GCCTGCTGCC AGGCCATTGC CGGGGCCGAC CTGACCGATG CGGCCCGTGC GCTGGACCTG
CCGGTGCAGG TGATCGCGGG CGGGCTGGAC GGCTCGACCC CGCCGGATCT GGTGCAGGCC
ACCGCCGCGC TGATCCCCGG CGCGCGCTTC GACCTGATCG CGGATGCCGC GCATATTCCC
TGCGTGGAGG CGCCCGCCGC CCATGCGGCC ATCCTCAACC GTTTTTTCAA GGACATCGGC
CATGTCTGA
 
Protein sequence
MRTIMANGAD LHVAVSGPET GPAVVFANSL GTDLRVWDGL IPHLAPGLRL VRYDKRGHGL 
SQETSGPYGI EMLADDAAAL ISALGLGRVV FVGLSIGGLI GLSLAARHPG LLAGLVVSNS
AARIGDAAMW NARIQAIRDE GLASIAAPTM ERWFSPAFRA KGLDAPWRRM LARQPQGGYV
ACCQAIAGAD LTDAARALDL PVQVIAGGLD GSTPPDLVQA TAALIPGARF DLIADAAHIP
CVEAPAAHAA ILNRFFKDIG HV