Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3480 |
Symbol | |
ID | 4582035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 626754 |
End bp | 627746 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639770793 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_917246 |
Protein GI | 119386191 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0459907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA CTGCCGCTGC CGTCCTGGTG GGAAGCCTGC TGTCGAGTGC CGCCTGGGCC GACCCCGTCA CGCTGCGCCT GGGCCATGCC GTATTCGAGC AGCATCCGAT CCACGACACC GCCCTCCGCT TCAAGGAAGC GGTCGAGCGG CTGTCGGATG GCGATATCAA GATCGACATT TTCCCCTCGC GCCAGCTTGG CGACGTGAAG GAGTTGATGG AGGGCGTGCA GTTCGGCACC GTCGACATGA CGGTGAACTC GACCTCGGCC TATTCGACGC TGGAGCCCTC GATCGACGCC TTCCAGCTGC CGGGCCTGAT CCCCGATTAC GAAGGGTTCG CGGCCATGGC GAAGACGCCC GAGGCGCGGG CGATCATGGA CAGGCTGGGA AACCACATGA TGGTCGCCCT GGGGGTCTAT GACGGCGGGC AACGCCATTT CCTGACCGTC GGGGCGCCGG TCGAAAGCCT GGCCGACATG CATCACAAGA AGACCCGCGT CGCGCCCAAC TGGATGTTTC TGGATGCGTG GCAGGCGGTG GGCGTGAACC CCACGCCGAT GGCCTATGGC GAGGTCTATT CGGCGCTGGA AACCGGCACG CTGGATGCGG TCGAGATCAA CCTGACCTCG ATCGAGAGCG AGAAATATTA CGAGATCGCC AAGGGCGTGT CGCTGACAGG CCATTACTTC TGGCCCAGCT TCCTGCTGGT CAACCAGATG AAGTTCAACT CGCTGACCCC CGAGCAGCAG GAGATCATGC GCCAGGCCGC CGACGAGATC GTCGAGCCGC AGGTGATGGC GGTCAAGGAT CTGGACGAGC AGATCAAGGC CCATCTGGCC GAACTGAACA TCCCGGTCGT GACGCCCTCG GATGCGTTCA GGGCCGAATT GCAGGCCGCC TTCGCCCCGG TGGTCGAGAA ATACGAGGCC GCCGATCCGC TGATCGCCGA TTTCGCGGCT GCGGCGAAAA AGCTGGCTCC GGCCGCTCAA TAA
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Protein sequence | MMKTAAAVLV GSLLSSAAWA DPVTLRLGHA VFEQHPIHDT ALRFKEAVER LSDGDIKIDI FPSRQLGDVK ELMEGVQFGT VDMTVNSTSA YSTLEPSIDA FQLPGLIPDY EGFAAMAKTP EARAIMDRLG NHMMVALGVY DGGQRHFLTV GAPVESLADM HHKKTRVAPN WMFLDAWQAV GVNPTPMAYG EVYSALETGT LDAVEINLTS IESEKYYEIA KGVSLTGHYF WPSFLLVNQM KFNSLTPEQQ EIMRQAADEI VEPQVMAVKD LDEQIKAHLA ELNIPVVTPS DAFRAELQAA FAPVVEKYEA ADPLIADFAA AAKKLAPAAQ
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