| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3427 |
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| Symbol | |
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| ID | 4581983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 569820 |
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| End bp | 570806 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770741 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_917194 |
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| Protein GI | 119386139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.884957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG GAAGAATCTT CGCTTTCGCG GCCGCTTGCG CCGTCGGGCT GGGCGTGTCG
GCGGCTGTGG CCGAGACCGC CTGGGACATG TCCGTGGTCT GGCCCGAGGG CAATTTCCAC
ACCCAGAACG CCATCGCCTT TGCCGAAGCG GTCAAGGACG TGACGGATGG CGAGGTGGTC
ATCACCGTCC ATTCCGGCGG TGCGCTGGGC ATCAAGGGCC CCGAGGGCAT GGCGGCGGTT
CGCGACGGGC TGGTGCCGAT CGCCGACATC CTGCTGAACC AGCAGGTGGG CGAGGCGCCG
ATCCTGGGCA TCGAGACGCT GCCCTATCTG GCGCCGACCA TGCCGGACCT GGCGCTTCTG
CACAAATTCT ATCGGCCCAA GCTCGAGGAG GTGGCCGAGG GCATGAACCA GAAGCTGCTC
TACCTGGTGC CGTGGCCGGG GCAGGCGGTG TTCGCACCCA ATCCGATCAA TGGTCTGGAC
GACATGAAGG GCCTGACGGT CCGCGTCGTG GATGCCAACG GTTCGTCCTA TTTCGAGGCG
CTCGGCGCCA CGCCGGTGCA GATGCCCTGG GGCGAGGTGG TGCCCTCGCT GGCGGCAGGC
ACGATCAAGG GCGTGACGAC CTCGTCCTCA TCGGGCGTGG ACGGCGCCTT CTGGGAGTTC
ACCAAGCACA TGAACACCTT CAACTGGCAG GCGTCGTCGA ATGCCGTGAT GGTGAACCTG
GATGCCTGGA ACGCGCTGGA GCCCGAGACC CGCGCTTCCA TCGAGGCGAC CGCCGCCAGG
ATGGAGGGCC AGTTCTGGCT CAACAGCCAG GCCGAGGACG CCAAGAAGCT GGCCGTCCTG
CAAGAGCACG GCATCGAGAT CACCGAGCCC TCGCCCGAAC TGCGCGCCGC GCTTCTGGAA
AGGGCGAAGC CGCTTTGGGA CGATTTCAAG GCGCGGGTGC CGGATGCGGC CGCCTATATC
GACGCCTACC TGACCGCCCG CCAATAG
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| Protein sequence | MKQGRIFAFA AACAVGLGVS AAVAETAWDM SVVWPEGNFH TQNAIAFAEA VKDVTDGEVV
ITVHSGGALG IKGPEGMAAV RDGLVPIADI LLNQQVGEAP ILGIETLPYL APTMPDLALL
HKFYRPKLEE VAEGMNQKLL YLVPWPGQAV FAPNPINGLD DMKGLTVRVV DANGSSYFEA
LGATPVQMPW GEVVPSLAAG TIKGVTTSSS SGVDGAFWEF TKHMNTFNWQ ASSNAVMVNL
DAWNALEPET RASIEATAAR MEGQFWLNSQ AEDAKKLAVL QEHGIEITEP SPELRAALLE
RAKPLWDDFK ARVPDAAAYI DAYLTARQ
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