| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3384 |
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| Symbol | |
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| ID | 4581941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 529196 |
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| End bp | 530473 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639770700 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_917153 |
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| Protein GI | 119386098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.976155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCC TCGTCTTCAT CCTGTCGCTT CTTGCAGCGA TCCTGATCGG TATCCCGATC
GCCTTCGGCC TGATCCTGTC CGGCATCGTC ATGATGTGGT GGCTTGGTGC GCTGGACTGG
CAGCTGATCG CGCTGCAGAT GACCAATGGC GCCGACAGCT TCCCCCTGCT GGCGATCCCC
TTCTTCATGC TGGCCGGTGA GGCGATGAAT GCCGGCGGCA TTTCCAAGCG CCTTGTCAAC
TTCGGCATGA CGCTTGTCGG CCACAAGCGC GGAGGTCTGG GCTATGTGAC CATCGTCGCG
GCGCTGCTGC TGGCCAGCCT TTCCGGATCC GCCGTGGCTG ATACCGCAGT TCTGGCAGGC
ATGCTGCTGC CGATCATGCG GCAGGCGGGC TACGACATCA ATCATTCCGG CGGTCTGATC
GCTTCGGGCG GCATCATCGC GCCGATCCTG CCTCCTTCGA TCGGCTACAT CGTCTTCGGT
GTGGCGGGTG GCGTGTCGAT CACCAAGCTG TTCATGGCGG GCATTGCCCC CGGCATCATG
ATGGCGCTGA CCCTTGCCGT CACCTGGTGG TTCCTTTCCC GGAACTCCGA GGTCAGCGTG
CCGCAGCGTG CGCCGCTGCG CGAGGTGCTG AAAGCAGCCG GTCAGGCAAG CCTTGCCTTC
ATCCTTCCGG TGATCATCAT CGTCGGTCTG AAAGCCGGAA TATTCACCCC GACCGAGGCC
GGTGTCGTGG CCTGTGTCTA TGCGATCTTC ATCGGTATGT TCGTCTACCG CGAACTGCAC
CCGAAGATGC TGTATCACGT CATGATCGCC GCGGTTCGCA CCACGGCCTC GGTGATGCTT
CTGGTCGCGG CGGCCTCGAT CACCGCCTAT CTGGTGGCCA TCGCCAACAT TCCCGGCGTG
ATTGGCGACA TGCTCAGCGG TGTGCGCGAA CATCCGGTGC TGCTGATGCT GGTCATCATG
ACGATCATTC TGGTCGTCGG AACTGCGCTG GACTTCATCC CGACCATCCT GATCCTGACG
CCTGTGCTGC TGCCGATCGC CAAAAGCGCG GGGATCGATC CGGTCTATTT CGGTGTCATG
TTCATCATGG CAGGCGCCAT CGGCCTGCTG ACGCCACCAG TGGGCGCGGT GCTGAACGTG
GTCTGCGCCG TGGGCAACAT GCGCTACACG GATGCCGTGC GGGGTGTCGT GCCCTTCCTG
ATCGTGCAGG CCTTCCTGAT CTTGCTGCTG GCCCTGTTCC CACAGCTGGT GATCGTGCCC
GCGAACTGGT TCTACTGA
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| Protein sequence | MILLVFILSL LAAILIGIPI AFGLILSGIV MMWWLGALDW QLIALQMTNG ADSFPLLAIP
FFMLAGEAMN AGGISKRLVN FGMTLVGHKR GGLGYVTIVA ALLLASLSGS AVADTAVLAG
MLLPIMRQAG YDINHSGGLI ASGGIIAPIL PPSIGYIVFG VAGGVSITKL FMAGIAPGIM
MALTLAVTWW FLSRNSEVSV PQRAPLREVL KAAGQASLAF ILPVIIIVGL KAGIFTPTEA
GVVACVYAIF IGMFVYRELH PKMLYHVMIA AVRTTASVML LVAAASITAY LVAIANIPGV
IGDMLSGVRE HPVLLMLVIM TIILVVGTAL DFIPTILILT PVLLPIAKSA GIDPVYFGVM
FIMAGAIGLL TPPVGAVLNV VCAVGNMRYT DAVRGVVPFL IVQAFLILLL ALFPQLVIVP
ANWFY
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