Gene Pden_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3333 
Symbol 
ID4581891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp494397 
End bp494957 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID639770650 
Producttransposase, IS4 family protein 
Protein accessionYP_917103 
Protein GI119386048 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.505103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCGAG AAAGGCATTT TCGCCAGGAT GATGATCGGG CTGGCCGCCG ACCACGGCGA 
GGAAAAGACC GTGATGATCG ACGCGACCTA TCTGAAAGCG CACCGCACCG CGACCAGCAT
GGCCGCGAAA AAGGGGGGCG TGGACGCCTC GTCGGCCGGA CCAAGGGCGG CATGAACACG
AAGCTGCATG CCATCTGTGA CAGCCAGGGC CGACCGCTCG ACCTGTTCGT CACCGCAGGG
CAGGTCAGCG ACTACATCGG GGCGCGGGCG TTGCTCAGCA GCCTCCCAAA GGTCGATTGG
CTGCTCGGGG ATCGCGGCTA TGACGCCGAC TGGTTCCGGG AAGCCTTGCA GGACAAGGGG
ATACGAGCCT GCATCCCCGG TCGAAAGCAG CGCAAGACAC CGGTCAAATA CGACAAGCGC
CGATACAAGC GGCGCAACCG CATCGAGATC ATGTTTGGCA GGCTCAAGGA CTGGCGGCGC
GTGGCAACCC GATACGACAG ATGCCCGAAG GTCTTCCTCT CGGCCATCGC GCTCGCGGCA
ACCGTCATTT ATTGGTTATG A
 
Protein sequence
MERERHFRQD DDRAGRRPRR GKDRDDRRDL SESAPHRDQH GREKGGRGRL VGRTKGGMNT 
KLHAICDSQG RPLDLFVTAG QVSDYIGARA LLSSLPKVDW LLGDRGYDAD WFREALQDKG
IRACIPGRKQ RKTPVKYDKR RYKRRNRIEI MFGRLKDWRR VATRYDRCPK VFLSAIALAA
TVIYWL